Pairwise Alignments

Query, 326 a.a., SyrM transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

 Score =  106 bits (264), Expect = 8e-28
 Identities = 87/301 (28%), Positives = 143/301 (47%), Gaps = 16/301 (5%)

Query: 32  IDLNLLVDLEALLQYRHITQAAQHVGRSQPAMSRALSRLRGMLKDDLLVAGSRGLVLTPL 91
           +DLNLLV L+AL+  R +T AA+ V  SQPAMS A++RLR    D+L     R L+ TP 
Sbjct: 6   LDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGRELIPTPR 65

Query: 92  AECLTQMLPSVLDAIRQMMNLSLA-----PAQRRWKVTMAMPDHQAVVLLPHLLPRLHER 146
           AE L    P+V DA+  +    +A     PAQ   +  + + D   +V    ++ RL   
Sbjct: 66  AEALA---PAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLARE 122

Query: 147 APHLDIVTDPLLGGALGLLEQGEIDVVVGQMGAAPLGYLRRRLYADSFTCVLRHNHPALA 206
           AP +     PL      LL +G++D +V         + + +L+A++  CV    +  L 
Sbjct: 123 APGVSFELLPLDDDPYELLRRGDVDFLVLPDLFMSSAHPKAKLFAEALVCVGCPTNEQLL 182

Query: 207 QEWTIEAFAALRHVAI----ASEPDELFGQIYDRLTKLGLQRGDPMVVSTVLTAAVLIAA 262
            E + E + ++ HVA     A +P   F Q    L + G +R   +VV        L+  
Sbjct: 183 GELSFEKYMSMGHVAAQFGRALKPS--FEQWL--LLEHGFKRRVELVVPGFTLIPPLLPH 238

Query: 263 TDSVLVVPSRVATRVAAMLSLAVIPPPVELRPYEVALIWHERCHRDPEHRWLRGEIAAAA 322
           T+ + ++P R+       + L ++  P+    +  A+ W    ++DP + W+R  +   A
Sbjct: 239 TNRIAIIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWMREILLQEA 298

Query: 323 S 323
           S
Sbjct: 299 S 299