Pairwise Alignments

Query, 326 a.a., SyrM transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 316 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  139 bits (349), Expect = 1e-37
 Identities = 97/308 (31%), Positives = 150/308 (48%), Gaps = 20/308 (6%)

Query: 29  LASIDLNLLVDLEALLQYRHITQAAQHVGRSQPAMSRALSRLRGMLKDDLLVAGSRGLVL 88
           L S+DLNLL  + AL+   ++T A +++G SQPAMS AL R+R +  D+L    SRG V+
Sbjct: 6   LGSVDLNLLKVIYALVVKGNMTAAGEYIGLSQPAMSHALKRVRAITGDELFKKTSRGFVM 65

Query: 89  TPLAECLTQMLPSVLDAIR-----QMMNLSLAPAQRRWKVTMAMPDHQAVVLLPHLLPRL 143
           T      T++ P+V   I       +  L+  PA       + M D+ +VVL+P L+ R+
Sbjct: 66  TRFC---TEIFPAVRRIIEDTETVMLQRLAFDPATSHRAFRIGMNDYFSVVLMPRLVERV 122

Query: 144 HERAPH--LDIVTDPLLGGALGL---------LEQGEIDVVVGQMGAAPLGYLRRRLYAD 192
              A H  L+++  P  G +            L +G IDV V      P  Y    L+ +
Sbjct: 123 RSEAEHCVLEVIHMPRTGISHNRDFMPVVQEHLNEGTIDVAVMTAENFPARYRCASLFTE 182

Query: 193 SFTCVLRHNHPALAQEWTIEAFAALRHVAIASEPDELFGQIYDRLTKLGLQRGDPMVVST 252
              C++  N+PA  +  T++A  +L HV + S P    G I +RL  +GL+R    VV  
Sbjct: 183 RRVCIMSANNPAAKEPLTLDALLSLGHVKVTSSPSRR-GWIDERLDAMGLERRVVAVVPH 241

Query: 253 VLTAAVLIAATDSVLVVPSRVATRVAAMLSLAVIPPPVELRPYEVALIWHERCHRDPEHR 312
              A  +++ +D V ++P  VA        L ++  P E      ++IW     RDP   
Sbjct: 242 FSAAVAIVSRSDLVAMMPESVAKLFERSHELLLLESPFEEEKQSTSMIWLAEKERDPASL 301

Query: 313 WLRGEIAA 320
           WLR +I+A
Sbjct: 302 WLREQISA 309