Pairwise Alignments

Query, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 302 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  112 bits (281), Expect = 8e-30
 Identities = 84/297 (28%), Positives = 141/297 (47%), Gaps = 5/297 (1%)

Query: 6   LDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGRELITTPR 65
           +D+NLLV  +ALM ++++T  A  + + QPA+S+A+ RLR  F D L    GR +  TPR
Sbjct: 9   VDMNLLVIFEALMFEKNLTRVAEKLFMGQPAVSAALGRLRDLFDDPLLLRNGRGMEPTPR 68

Query: 66  AEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVAREAPG 125
           A A+   ++ A+  I  ++     F+P+ S   FRI LSD      F  ++ ++  EAPG
Sbjct: 69  AVAILKELQPAMDTISGAVSRAKDFDPSTSCAVFRIGLSDDAEFGLFPPLLSQLREEAPG 128

Query: 126 VSFELLPPDD-NPDELLRRGEVDFLIFPDVFMSSVHPKAKLFDQTLVSVGCLTNEQLLGD 184
           +   +   +      LL  GE+   +     + +   + KL D   +    L  +     
Sbjct: 129 IIVVVRRANYLLMSSLLASGEITVGVSYTTELPANAKRKKLRD---IPCKVLRGDDGAAP 185

Query: 185 LSFERYMSMGHVAAQFGRALKPSVEQWLLLEHGYKRRIELVVPGFNLIPPLLSGTKRIAI 244
           L+ + Y    H    F   L  +++   L   G  RR+ L VP F+ +  LL+GT+ IA 
Sbjct: 186 LTLDDYCERPHAMVSFSGDLSGNID-LDLARIGRARRVVLAVPQFSGLRALLAGTQIIAT 244

Query: 245 IPLRLANHFAKSIPLRIVKHPLPLLSFTEAVQWPALHNKDQASIWMREILLDEAARI 301
           +P   A    +   LR    P  + +   ++ W  +H+ D A  W+R  + +  AR+
Sbjct: 245 VPDYAACALTEGTALRAEDPPFAIDAAELSMVWSGVHDNDPAERWLRARIGEHMARV 301