Pairwise Alignments

Query, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 304 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  120 bits (302), Expect = 3e-32
 Identities = 91/293 (31%), Positives = 144/293 (49%), Gaps = 17/293 (5%)

Query: 6   LDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGRELITTPR 65
           +DLNLL+  + LM +RSVT AA  + L QPA+S+A++RLR  F D LF   GR +  + R
Sbjct: 9   VDLNLLIVFETLMHERSVTRAAEKLFLGQPAISAALSRLRGLFDDPLFVRTGRSMEPSAR 68

Query: 66  AEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVAREAPG 125
           A  +   +  AL  I  ++     F+PA S   FRI LSD +      ++++R+  EAPG
Sbjct: 69  AVEIFALLSPALDSISTAVSRAAEFDPATSTAVFRIGLSDDVEFALLPQLLKRLRAEAPG 128

Query: 126 -------VSFELLPPDDNPDELLRRGEVDFLIFPDVFMSSVHPKAKLFDQTLVSVGCLTN 178
                  V++ L+P       LL  GE+   +     + + + K K+  ++L  +  L  
Sbjct: 129 IVLVVRRVNYILMP------GLLASGEISIGVSYTADLPA-NAKRKVLRRSLPKL--LRA 179

Query: 179 EQLLGDLSFERYMSMGHVAAQFGRALKPSVEQWLLLEHGYKRRIELVVPGFNLIPPLLSG 238
           + + G LS + + +  H    F   L   +++  L +   KR + L VP FN +  LL+G
Sbjct: 180 DSVPGSLSLDDFCARPHALVSFAGDLSGFIDE-ELEKLDRKRHVVLAVPQFNGLGTLLAG 238

Query: 239 TKRIAIIPLRLANHFAKSIPLRIVKHPLPLLSFTEAVQWPALHNKDQASIWMR 291
           T  +A +P   A     +  LR    PLP+ SF   + W    + D    W+R
Sbjct: 239 TDILATVPDYAAEALTSAGGLRAEDPPLPVRSFELHMAWRGSQDNDPGERWLR 291