Pairwise Alignments

Query, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 308 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  126 bits (317), Expect = 6e-34
 Identities = 93/292 (31%), Positives = 149/292 (51%), Gaps = 16/292 (5%)

Query: 6   LDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGRELITTPR 65
           +DLNLLV LDAL++++ VT AA  ++LSQPA+S A+ARLR    D L   QG  L+ T R
Sbjct: 13  IDLNLLVILDALLSEQHVTRAAERLHLSQPAVSHALARLRDLLGDPLLVRQGGSLVPTAR 72

Query: 66  AEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVAREAPG 125
           A  LAP + +AL  +Q ++++ + F+PA + R FR+ +SD+   +F   +V  + REAPG
Sbjct: 73  ALELAPPLTEALGQVQ-ALLAPNRFDPASAKRRFRVAMSDYSAAIFLPDLVRTLRREAPG 131

Query: 126 VSFELLPPD-DNPDELLRRGEVDFL--IFPDVFMSSVHPKAKLFDQTLVSVGCLTNEQLL 182
           +  +++    +   + +  G++D    +FPD  M +      LF++      CL +   L
Sbjct: 132 IDLQIIQASREGMVDGVLNGDLDLAAGVFPD--MPAELRTTPLFEEHYT---CLVDRDSL 186

Query: 183 ---GDLSFERYMSMGHVAAQFGRALKPSVEQWLLLEHGYKRRIELVVPGFNLIPPLLSGT 239
              G L    Y+S  HV  +   +  P +E+  L     +R + + +P + + P L+ GT
Sbjct: 187 PASGTLDLPTYLSRPHVLLEMRGSGTPEIER-ALTTIRERRHVAISLPHWGVAPQLIQGT 245

Query: 240 KRIAIIPLR-LANHFAKSIPLRIVKHPLPLLSFTEAVQWPALHNKDQASIWM 290
             I  +  R L N       L  V  P  + SF   + W A    D    W+
Sbjct: 246 DLILTVSSRGLLN--IDHQHLLAVPAPFHIPSFAFELAWHARRGGDSGLQWL 295