Pairwise Alignments

Query, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 311 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  112 bits (281), Expect = 9e-30
 Identities = 86/301 (28%), Positives = 137/301 (45%), Gaps = 19/301 (6%)

Query: 4   KGLDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGRELITT 63
           + LD+ +L   DALM +RSV+ AA  + LSQPA+S+++ RLR  F D LF    R +  T
Sbjct: 7   RSLDVGMLRTFDALMRERSVSRAATRLFLSQPAVSASLNRLRDTFGDPLFTRTARGVEPT 66

Query: 64  PRAEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVAREA 123
            RA ALA  +   L  +   +   + F+PA S R FRI   D+ + +    +   +    
Sbjct: 67  ARAHALAGQVERVLADLSAMLEPGEGFDPAASQRIFRISGGDYASHLLLPTLANELVACG 126

Query: 124 PGV-------SFELLPPDDNPDELLRRGEVDFLIFPDVFMSSVHPKAKLFDQTLVSVGCL 176
             V       SF  L       E LR+G+ D  + P +   S    A L++   V     
Sbjct: 127 SRVRIYWETSSFLTL------TERLRKGDFDIAVLPRLQPPSDCESALLYEDRYVVAVRR 180

Query: 177 TNEQLLGDLSFERYMSMGHVAAQFGRALKPSVEQWLLLEHGYKRRIELVVPGFNLIPPLL 236
            +  L  + + + +    HV   +G +    +   +L   G  R + + +  F  I  LL
Sbjct: 181 GHPTLGREATLDAFCGAPHVFLGYGSSALDDLIDQVLARLGRTRTMSVAMTSFGQIVDLL 240

Query: 237 SGTKRIAIIPLRLANHFAKSIPLRIVKHPLP--LLSFTEAVQWPALHNKDQASIWMREIL 294
           + T  +A++PLR+A  F   + +    HPLP  L  +   V W    N D   +W+++ L
Sbjct: 241 AQTDHVAVMPLRVAERFRDVLAV----HPLPFELQGYRSVVCWNRRSNSDAGVLWLKDAL 296

Query: 295 L 295
           L
Sbjct: 297 L 297