Pairwise Alignments

Query, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 300 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  107 bits (266), Expect = 5e-28
 Identities = 83/290 (28%), Positives = 136/290 (46%), Gaps = 6/290 (2%)

Query: 7   DLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGRELITTPRA 66
           DLNLLV  + +  +R+V  AA  +NLS  A+S  + RLR    D LF    + ++ T RA
Sbjct: 11  DLNLLVLFETVFDERNVGRAAERLNLSASAVSHGLGRLRRLLNDPLFLKTPKGVVPTERA 70

Query: 67  EALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVAREAPGV 126
           + L   IRD L  ++  I + + F+PA+S R F I  +D  + VF   +++ +AR APG+
Sbjct: 71  KELEAPIRDVLARVRTVISTAEPFDPARSRRRFTIGTADGFS-VFLPPLLDEIARTAPGI 129

Query: 127 SFEL--LPPDDNPDELLRRGEVDFLIFPDVFMSSVHPKAKLFDQTLVSVGCLTNEQLLGD 184
              +  +  +    +L  R  +D  I P   + +     +L++   V +   +    L +
Sbjct: 130 DLVVRHMQMETALSDLDGR-LIDVAIAPFYELPARFAAQRLYEDDFV-IAAQSRHPFLKN 187

Query: 185 LSFERYMSMGHVAAQFGRALKPSVEQWLLLEHGYKRRIELVVPGFNLIPPLLSGTKRIAI 244
            + E Y  M H+     R     +   LL   G  RR+ L VP F L   LL+ T+ + +
Sbjct: 188 PTLENYCRMQHLLVA-PRGDPSGIVDELLESRGLSRRVALAVPNFMLALDLLTKTQLVCV 246

Query: 245 IPLRLANHFAKSIPLRIVKHPLPLLSFTEAVQWPALHNKDQASIWMREIL 294
           +P R     A+   +   K PL L + T     P     D   +W+ ++L
Sbjct: 247 LPKRFVEMHAERFAVATAKLPLDLGAPTIQAVAPKAALMDGGLVWLLDVL 296