Pairwise Alignments

Query, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

 Score =  489 bits (1258), Expect = e-143
 Identities = 246/308 (79%), Positives = 272/308 (88%)

Query: 1   MRFKGLDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGREL 60
           MRF+GLDLNLLVALDALMT+R +TAAAR + LSQPAMS+AIARLR+YF DELF MQGREL
Sbjct: 1   MRFRGLDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGREL 60

Query: 61  ITTPRAEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVA 120
           I TPRAEALAPA+RDALLHIQ S+I+WD  NPAQSDR FRIILSDFMTLVFFE+VVER+A
Sbjct: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLA 120

Query: 121 REAPGVSFELLPPDDNPDELLRRGEVDFLIFPDVFMSSVHPKAKLFDQTLVSVGCLTNEQ 180
           REAPGVSFELLP DD+P ELLRRG+VDFL+ PD+FMSS HPKAKLF + LV VGC TNEQ
Sbjct: 121 REAPGVSFELLPLDDDPYELLRRGDVDFLVLPDLFMSSAHPKAKLFAEALVCVGCPTNEQ 180

Query: 181 LLGDLSFERYMSMGHVAAQFGRALKPSVEQWLLLEHGYKRRIELVVPGFNLIPPLLSGTK 240
           LLG+LSFE+YMSMGHVAAQFGRALKPS EQWLLLEHG+KRR+ELVVPGF LIPPLL  T 
Sbjct: 181 LLGELSFEKYMSMGHVAAQFGRALKPSFEQWLLLEHGFKRRVELVVPGFTLIPPLLPHTN 240

Query: 241 RIAIIPLRLANHFAKSIPLRIVKHPLPLLSFTEAVQWPALHNKDQASIWMREILLDEAAR 300
           RIAIIPLRL  +F ++IPLRIVKHPLP L FTEAVQWPALHNKD  +IWMREILL EA+R
Sbjct: 241 RIAIIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWMREILLQEASR 300

Query: 301 IAAPRETA 308
                ET+
Sbjct: 301 SEFQGETS 308