Pairwise Alignments

Query, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 309 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  125 bits (315), Expect = 1e-33
 Identities = 89/290 (30%), Positives = 147/290 (50%), Gaps = 7/290 (2%)

Query: 6   LDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGRELITTPR 65
           +DLNLL+AL AL+++R VT AA  ++ SQPA+S A+A+LR +F D L   QG  +  T R
Sbjct: 14  IDLNLLLALHALLSERHVTRAALRLHRSQPAVSHALAQLRKHFDDPLLVRQGGGMALTAR 73

Query: 66  AEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVAREAPG 125
           A++LA  ++DAL +++ S+++  +F PA++ R FR+ LSD+ + +    ++  + + APG
Sbjct: 74  AQSLAQPLQDALSNLE-SLLATPLFEPAKAQRRFRLSLSDYASRIILPHLLRHLRQVAPG 132

Query: 126 VSFELLPPD-DNPDELLRRGEVDFL--IFPDVFMSSVHPKAKLFDQTLVSVGCLTNEQLL 182
           V   +     +     L  GE+D    +FP++          LF    +SV         
Sbjct: 133 VDLAISQASRETMLAQLLDGELDLALGLFPELPQDIT--AQPLFADRFISVADRQVLPAS 190

Query: 183 GDLSFERYMSMGHVAAQFGRALKPSVEQWLLLEHGYKRRIELVVPGFNLIPPLLSGTKRI 242
           GD++ E +++  HV           +E+  L   G +RRI L +P ++    +L+GT  I
Sbjct: 191 GDMALEDWLARPHVLMAMRPDAFDEIER-ALAARGLQRRIALALPHWSAAVEVLAGTDLI 249

Query: 243 AIIPLRLANHFAKSIPLRIVKHPLPLLSFTEAVQWPALHNKDQASIWMRE 292
             +  R      +   LR    PL + SF     W    + D    W+RE
Sbjct: 250 LTVASRAVGSLRQHKTLRQFTPPLAIPSFDYQQAWHNRKDSDPGHRWLRE 299