Pairwise Alignments

Query, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 308 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  110 bits (276), Expect = 3e-29
 Identities = 86/311 (27%), Positives = 145/311 (46%), Gaps = 10/311 (3%)

Query: 1   MRFKGLDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGREL 60
           M    +DLNL +  DA+ T+ ++T A + + ++QPA+S+A++RLR  F D LF    + +
Sbjct: 1   MNLSKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALSRLRETFNDPLFVRTAQGM 60

Query: 61  ITTPRAEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVA 120
           + TP A+ +   +R+AL  ++ S+     FNP Q+++ FRI ++D    V    + +R+ 
Sbjct: 61  VPTPMAQNIIGPVRNALALLRTSVQESRTFNPQQANKTFRISMTDLTEAVILPPLFQRLR 120

Query: 121 REAPGVSFE-LLPPDDNPDELLRRGEVDFLIFPDVFMSSVHPKAKLFDQTLVSVGCLTNE 179
           R AP V  E  L       + L  G +DF I   +         KL     V    L   
Sbjct: 121 RLAPAVMIESFLCKRRETTKELAAGRLDFAIDAPLNTDPQVRHIKLMQDRYVC--ALRQG 178

Query: 180 QLLGD--LSFERYMSMGHVAAQFGRALKPSVEQWLLLEHGYKRRIELVVPGFNLIPPLLS 237
             L D  L+ + Y+ M H+     R     V+   L + G +R++ L    + +   +L 
Sbjct: 179 HPLADSKLTLDSYLGMTHIHISSRRNGLGYVD-LALGKMGVQRKVALRSQHYLMASQVLQ 237

Query: 238 GTKRIAIIPLRLANHFAKSIPLRIVKHPLPLLSFTEAVQWPALHNKDQASIWMREILLDE 297
            T     +P R    FA+   LR    P+ + +    + W    ++D A+ WMRE + + 
Sbjct: 238 QTDMAMTVPER----FARRHQLRYQALPVEVPALETHLYWHESTDQDPANRWMREQITEL 293

Query: 298 AARIAAPRETA 308
             R+ A  E A
Sbjct: 294 CERVVAEEEKA 304