Pairwise Alignments

Query, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 320 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  148 bits (373), Expect = 2e-40
 Identities = 98/306 (32%), Positives = 159/306 (51%), Gaps = 10/306 (3%)

Query: 1   MRFKGLDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGREL 60
           M  + LDLNLL+ LD L  +++++AAAR + +SQP  S+++ RLR YF+D+LF   GR +
Sbjct: 1   MDIRRLDLNLLLLLDELYREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGM 60

Query: 61  ITTPRAEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVA 120
             TP   ++A ++   L  I+  I++   F P QSDR F I  SD   L+F   ++ R+ 
Sbjct: 61  RPTPFTVSIAASVSGVLERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLG 120

Query: 121 REAPGVSFELLP-PDDNPDELLRRGEVDFLI--FPDVFMSSVHPKAKLFDQTLVSVGCLT 177
            +AP      +  P    ++ L +G VD  +  FPD+    V  +A LF+     +    
Sbjct: 121 EDAPNTDLRCVSLPHQQLEQALEQGSVDLAVGYFPDLQGEQVKTQA-LFEHNFTCI-VRR 178

Query: 178 NEQLLGD-LSFERYMSMGH-VAAQFGRALKPSVEQWLLLEHGYKRRIELVVPGFNLIPPL 235
           N   +GD LS E++++  H V  Q GR+    + +  L E   +RR+ L VP F  +P L
Sbjct: 179 NHPSIGDTLSLEQFLAADHLVVNQEGRS--QEIFEQRLRELKLQRRVHLEVPHFMSVPQL 236

Query: 236 LSGTKRIAIIPLRLANHFAKSIPLRIVKHPLPLLSFTEAVQWPALHNKDQASIWMREILL 295
           ++ T  +A +PL L   FA S  ++++  P+ +  F   + W      D A  W R  + 
Sbjct: 237 IASTNMVATVPLSLGVWFA-SEQIKMLTPPIEVEKFELKLHWHRQMEDDPAVSWFRNAVF 295

Query: 296 DEAARI 301
           +E   +
Sbjct: 296 EELCNL 301