Pairwise Alignments

Query, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

Subject, 317 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  124 bits (310), Expect = 4e-33
 Identities = 94/294 (31%), Positives = 136/294 (46%), Gaps = 10/294 (3%)

Query: 4   KGLDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGRELITT 63
           +  DLNLLVA DA+M + SVT AAR + + QPAMS  I+ LR+ FQDELF   G+ +  T
Sbjct: 10  RSFDLNLLVAFDAMMEEMSVTRAARRLKIQQPAMSHNISTLRTLFQDELFIRVGQIMKPT 69

Query: 64  PRAEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVAREA 123
            RA  L+  +R AL   Q +++  D F PA   R FR+ LS  + L+    +  R+   A
Sbjct: 70  ARALNLSGPVRQALRQAQAAVLMADAFEPATEQRTFRLGLSSEVELLLLPDLTARLRDIA 129

Query: 124 PGVSFELLPPD-DNPDELLRRGEVDFLIFPDVFMSSVHPKAKLFDQTLVSVGCLTNEQLL 182
           PG+       D    + +L  G +D  +       S H    L+     SV C  N QLL
Sbjct: 130 PGIRILARGGDATEVNAMLDAGVIDMSVGCSYLPDSRHHSEPLYQS---SVLCCFNPQLL 186

Query: 183 ---GDLSFERYMSMGHVAAQFGRALKPSVEQWLLLEH-GYKRRIELVVPGFNLIPPLLSG 238
                +S + YM+  H       +L   V+    LEH G +  +    P F  +      
Sbjct: 187 KVSNPVSLDAYMAAQHAVISQTDSLHGCVKD--ALEHAGAELEVVAAAPDFMSVLATARS 244

Query: 239 TKRIAIIPLRLANHFAKSIPLRIVKHPLPLLSFTEAVQWPALHNKDQASIWMRE 292
           +  IA +  R+A  +   + L +   PL L     A+ WP   + D    W+RE
Sbjct: 245 SAVIATVSSRIARRYGPLLGLEVSPVPLALSFPPVAMVWPLHMDSDLGCAWLRE 298