Pairwise Alignments
Query, 500 a.a., NifD nitrogenase molybdenum-iron protein alpha chain from Sinorhizobium meliloti 1021
Subject, 457 a.a., nitrogenase iron-molybdenum cofactor biosynthesis protein NifE from Dickeya dianthicola ME23
Score = 218 bits (554), Expect = 5e-61
Identities = 132/436 (30%), Positives = 229/436 (52%), Gaps = 21/436 (4%)
Query: 64 PGVMTIRGCAYAGSKGVVWGPIKDMVHISHGPVGCGQYSWSQRRNYYVGTTGIDAFVTMQ 123
PG T GCA+ G++ + P+ D+ H+ HGP+GC SW R + G T +
Sbjct: 30 PGA-TAGGCAFDGAQ-ITLLPLADVAHLVHGPIGCTGSSWDNRGSRSSGPT----LNRLG 83
Query: 124 FTSDFQEKDIVFG-GDKKLEKIIDEIEELFPLNNGVTVQSECPIGLIGDDIEAVSRKKAE 182
FT+D E+D++ G G+++L + I + V + + C + GDDI+AV R +
Sbjct: 84 FTTDLNEQDVIMGRGERRLFHAVRHIVSRYH-PTAVFIYNTCVPAMEGDDIDAVCRAASA 142
Query: 183 EYKTTIVPVRCEGFRGVSQSLGHHIANDAIRDWVFDTTEVA--------YEAGRYDVNVI 234
+V + GF G S++ G+ +A + + V E A R+DV +I
Sbjct: 143 AVGVPVVAIDAAGFYG-SKNFGNRLAGEVMVKQVIGQREPAPWPQDTPFAPEHRHDVGLI 201
Query: 235 GDYNIGGDAWASRILLEEIGLHVVGNWSGDATLAEIERAPTAKLNLIHCYRSMNYICRHM 294
G++NI G+ W LL+E+G+ V+G+ SGDA AEI+ A+ N++ C R++ + R +
Sbjct: 202 GEFNIAGEFWNVLPLLDELGIRVLGSLSGDARFAEIQTLHRAEANMLVCSRALINVARQL 261
Query: 295 EEKYGVPWMEYNFFGPSQIEASLRQIAKHFG-PEIEERAERVIAKYSGLTDAVIDKYWPR 353
E++YG+PW E +F+G + +LRQ+A G ++ R E +IA+ T + Y R
Sbjct: 262 EQRYGIPWFEGSFYGVRAMSDALRQLAAMTGDTDLMTRTETLIAREEAATAQALAPYRER 321
Query: 354 LHGKRVMLYVGGLRPRHVITAYEDLGMEIVGTGYEFAHNDDYQRTGHYVKEGTLIYDDVT 413
L G++V+LY GG++ V++A +DLG+ +V TG + +D QR + + L+ ++
Sbjct: 322 LQGRKVLLYTGGVKSWSVVSALQDLGVTVVATGTRKSTEEDKQRIRELMGDDALMLEEGN 381
Query: 414 GYELEKFIERIRPDLVGSGIKEKYSVQKMGIPFRQMHSWDYSGPYHGYDGFAIFARDMDL 473
L + R D++ +G + Y+ K +PF ++ + + GY G A+ + L
Sbjct: 382 ARTLLDVVYRYGADMMIAGGRNMYTAYKARLPFLDINQ-EREHAFAGYRGLVALAQQLCL 440
Query: 474 AVNNPVW--DLYDAPW 487
+++P+W APW
Sbjct: 441 TLDSPIWRQTHQRAPW 456