Pairwise Alignments

Query, 541 a.a., Fis family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 592 a.a., Nif-specific regulatory protein from Xanthobacter sp. DMC5

 Score =  456 bits (1172), Expect = e-132
 Identities = 269/562 (47%), Positives = 355/562 (63%), Gaps = 33/562 (5%)

Query: 11  IYSISKALMAPTRLETTLNNFVNTLSLILRMRRGGLEIPASEGETKITAATR-NSGSPSA 69
           IY ISK L AP RLETTL++ VN LS  ++MR G + +   +G   IT     N G+ + 
Sbjct: 31  IYEISKILTAPNRLETTLSSVVNLLSSFMQMRHGVISLLEDDGIPDITVGGGWNEGTDAR 90

Query: 70  ADYTVPKAAIDQVM-TAGRLVVPDVCNSELFKDQIKWRGIGPT-----AFIAAAVEVDHE 123
               +P+ AI QV+ TA  L+  +V +   F +    + +G +     +FI   + V   
Sbjct: 91  YRARLPEKAIGQVIATAVPLIAENVASHPAFSEADA-QALGASEDSRVSFIGVPIRVASR 149

Query: 124 TGGMLWFECAEE--SDYDYEEEVHFLSMAANLAGRAIRLHRTISR-RERTFAEEQQEQQN 180
             G L  +   +  S +  + +V FL+M ANL G+ ++LHR +SR RER  AE  + Q+ 
Sbjct: 150 VIGTLTIDRVWDGRSVFRLDSDVRFLTMVANLIGQTVQLHRVVSRDRERLMAESGRLQKE 209

Query: 181 SRDEQSQSSARQRL-LKNDGIIGESTALMTAVDTAKVMAETNSIVLLRGETGTGKECFAK 239
             + +  S+ R+R  +  DGIIG+S  +   +D   ++A+++S VLLRGE+GTGKE  AK
Sbjct: 210 LSELKPTSAGRERKRVYVDGIIGDSREIRGLLDKIMIVAKSHSPVLLRGESGTGKELIAK 269

Query: 240 LIHQHSTRQKKPFIKFNCPALSESLLESELFGHEKGAFTGAIAQRVGRFESANGGTLLLD 299
            IH+ S R K PFIK NC AL ES+LESELFGHEKGAFTGA+  R GRFE A+ GTL LD
Sbjct: 270 AIHELSPRAKGPFIKLNCAALPESVLESELFGHEKGAFTGAVGARKGRFELADKGTLFLD 329

Query: 300 EIGEIPPAFQAKLLRVIQEGEFERVGGTKTLKVDVRLIFATNKDLEMAVQNGEFREDLYY 359
           EIGEI P+FQAKLLRV+QE EFERVGG+ TLKV+VR++ ATNK+LE AV   EFR DLYY
Sbjct: 330 EIGEISPSFQAKLLRVLQEQEFERVGGSHTLKVNVRVVAATNKNLEEAVAKNEFRADLYY 389

Query: 360 RISGVPLILPPLRHRDGDIPLLARAFLQRFNEENGRDLHFAPSALDHLSKCKFPGNVREL 419
           RIS +P+I+P LR R GDIPLLA  FL RFN ENGRDLHF   A+D L  C FPGNVREL
Sbjct: 390 RISVIPVIVPSLRDRRGDIPLLANEFLDRFNRENGRDLHFNQDAMDVLMGCGFPGNVREL 449

Query: 420 ENCVRRTATLARSKTITSSDFACQTDQCFSSRLWKG-VHCSHGHIEIDAPAGTTPLL--- 475
           ENCV+RTATLA+  +I   DFAC+ ++C S+ LW+           ++ P    P L   
Sbjct: 450 ENCVQRTATLAQGGSIVGDDFACRHNECLSALLWRSPADAPQTRRPMEIPLPVMPPLSAI 509

Query: 476 ---GAPANDVP-------------PKEPGSAGVA-SNLIERDRLISALEEAGWNQAKAAR 518
               A +N VP             P  P  A V    + ER+RL+ A+E AGW QAKAAR
Sbjct: 510 SGEAANSNTVPRLPPLTVPVPTPAPAVPVRATVLDEEMSERERLVDAMERAGWVQAKAAR 569

Query: 519 ILEKTPRQVGYALRRHGVDVRK 540
           +L  TPRQ+GYAL++H +++++
Sbjct: 570 LLGLTPRQIGYALKKHDIEIKR 591