Pairwise Alignments

Query, 359 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 380 a.a., putrescine ABC transporter, ATPase component (from data) from Pseudomonas simiae WCS417

 Score =  246 bits (627), Expect = 9e-70
 Identities = 138/312 (44%), Positives = 196/312 (62%), Gaps = 6/312 (1%)

Query: 6   LQIRGIRKEYGPVTAVQDVTLDVAQGEFLTFLGPSGSGKSTTLYILAGFENPTRGDILLN 65
           ++I  + K++    AV DV+L++ +GE    LG SGSGKST L +LAGFE PT G I L+
Sbjct: 23  VKIDRVTKKFDETIAVDDVSLEIKKGEIFALLGGSGSGKSTLLRMLAGFERPTEGRIYLD 82

Query: 66  GETLLATPSHKRNIGMVFQRYTLFPHLSVGENIAFPLKVRRLPKAEIDAKVRAMLKLVRL 125
           GE +   P ++R I M+FQ Y LFPH++V +NIAF L+  ++PKAEIDA+V  MLKLV++
Sbjct: 83  GEDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLQQDKIPKAEIDARVAEMLKLVQM 142

Query: 126 EGFEDRKPAQMSGGQQQRVALARALAYDPPVLLMDEPLSALDKKLREEIQHEIRRIHQQT 185
             +  RKP Q+SGGQ+QRVALAR+LA  P +LL+DEP+ ALDKKLR ++Q E+  I ++ 
Sbjct: 143 SQYAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRSQMQLELVEIIERV 202

Query: 186 EVTILYVTHDQEEALRLSDRIAVFSKGVIDQIGTGPELYANPATRFVAEFIGDSDFLPCD 245
            VT + VTHDQEEA+ +++RIA+   G I QIG+  ++Y  P +R V EFIG+ +     
Sbjct: 203 GVTCVMVTHDQEEAMTMAERIAIMHLGWIAQIGSPIDIYETPTSRLVCEFIGNVNIFDTQ 262

Query: 246 VVSTVNGRAEIAVCGSMTFSNIPLHGTASL--GSKAALMLRPERLLLS---KTKSDIGLP 300
           VV    G A +  C  +       +G A+          +RPE+LL++    T       
Sbjct: 263 VVDDAEGHA-VLKCPDLDRDIYVGYGIATSVEDKSVTYAIRPEKLLVTTEMPTCEHNWSS 321

Query: 301 VTVSDITFLGNN 312
             V DI +LG +
Sbjct: 322 GKVHDIAYLGGH 333