Pairwise Alignments

Query, 266 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 264 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score =  177 bits (448), Expect = 3e-49
 Identities = 87/233 (37%), Positives = 143/233 (61%)

Query: 25  FLLLPILFIAVLSFGSSQWLIFPPPGWTLRWYQELLEDPRWLDSAWTSFRIAIIVTVLSV 84
           FLL P+L +  +SF    ++ FPP  W+++WY  +  +   +++ W S  +A +VT LS+
Sbjct: 20  FLLAPLLVVLPISFSGDDFMAFPPSSWSVKWYGAIFANSVMMNAFWISLALAFVVTALSL 79

Query: 85  LLGLVTSFGLNRGRFLFREALKALFLTPMILPVVVLAVALYAFFLQIGLNGTLTGFVISH 144
            +GL  ++ L R +    EAL  LF  P++LP +VL +AL   F  +GL G+  G V +H
Sbjct: 80  GIGLPAAYALVRLKPPGAEALSNLFSAPLLLPTIVLGLALLLVFAPMGLIGSFQGLVAAH 139

Query: 145 LVLALPFSILSITNALEGFDKSIEDAAVLCGASPFEAKIRVTLPAISHGVFSAAIFSFLT 204
           L++ LP+++  ++ AL     ++E+AA + GA P     RVTLP +  G+ S     FL 
Sbjct: 140 LIVTLPYAVRVLSTALANLPLTVEEAAGMLGARPLTVFFRVTLPMMRSGLVSTTALCFLV 199

Query: 205 SWDEVVVAIFMASPTLQTLPVKVWSTLRQDLTPVVAAASTLLILLTVLLMVLV 257
           S+DEVV+++FM  P LQTLPV +++ + Q   P+ AA S LL++LT+ ++++V
Sbjct: 200 SFDEVVLSLFMTGPRLQTLPVAMYNHVDQQADPMAAAISVLLVVLTLAVVLVV 252