Pairwise Alignments

Query, 291 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 277 a.a., Spermidine/putrescine import ABC transporter permease protein PotB (TC 3.A.1.11.1) from Variovorax sp. SCN45

 Score =  144 bits (364), Expect = 2e-39
 Identities = 89/259 (34%), Positives = 137/259 (52%), Gaps = 10/259 (3%)

Query: 26  LTLPALGLLILFFVLPVAMLLTRSVTEPVPGL--------GNYAELLGSSTYLRIFANTF 77
           LTLPA+ +++   V P+AMLL  S+    P           NY ++     +  + + T 
Sbjct: 4   LTLPAIAIVLALMVAPMAMLLRYSLNIYTPTELMVEAFTPRNYVQVFADPYFREVLSTTL 63

Query: 78  IVSSLVTLVSLLIGFPVAWALAIMPSRAASIVFAILLLSMWTNLLARTYAWMVLLQRTGV 137
            V+++ TL++LL+G P  + LA MP R    +    +L +    + R+  W+ LL  +G+
Sbjct: 64  QVAAVTTLIALLVGLPAGYTLARMPRRWKMWLTLATILPLMVGNVVRSAGWLALLGNSGL 123

Query: 138 INKMLLGMGLIDTPLPLVNNLTGVTIGMTYIMLPFIILPLYGVIRKIDPAILQAAALCGA 197
            N +    GL+  P+ L+ N   V   M  I+LP +++ L  VI  I   + +AAA  GA
Sbjct: 124 FNAVAQWSGLVREPMQLMFNRPAVVGVMVTIVLPLMVMTLASVIEGIPRNVEEAAANLGA 183

Query: 198 NRWQSLVRVLLPLAMPGMAAGALMVFVMSLGYFVTPALLGGTS-NMMLAELIAQFVQSLV 256
             +    RV+LP AMPG+ AG  +VF++ +  + TP L+GG    MM  E+  QFV  L 
Sbjct: 184 RPFTVFRRVVLPQAMPGVIAGMSLVFILCMNAYATPVLIGGPRFRMMTPEIYQQFV-GLN 242

Query: 257 NWGMGGAAALVLLVVTLAL 275
           NW  G A A +LL VTLA+
Sbjct: 243 NWPFGAALAFMLLAVTLAV 261