Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 343 a.a., Spermidine/putrescine-binding periplasmic protein from Xanthobacter sp. DMC5

 Score = 93.6 bits (231), Expect = 7e-24
 Identities = 90/302 (29%), Positives = 142/302 (47%), Gaps = 29/302 (9%)

Query: 1   MNRIFVLAATAATIATAMPATAAD-LVFTSWGGTTQDAQKIAWAEKFTEKTGINV--LQD 57
           MN   V    A     A PA+AA+ LV ++WGG+ +D    A A KFT+ TG+ V  +  
Sbjct: 1   MNGKIVALGLALAAFVAGPASAAEKLVVSTWGGSFRDLIAEAIASKFTKDTGVEVEYITG 60

Query: 58  GPTDY---GKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVI-DKSKLDPRF- 112
           G  D     KL      + +T+    V   YA       L E LD S + + SKL P+  
Sbjct: 61  GTIDRLNKAKLAKGSPESDITFTTAHVGWLYA----NDDLFETLDLSKMPNASKLVPQAK 116

Query: 113 VTDYSVGSFYYSFVIGCNKDAVDACPK-----TWADLFDAQKFPGMRAFYKWSAPGVIEA 167
           V+ Y +G++ Y + IG   D     PK     +WADL++ +   GM A   +    +I  
Sbjct: 117 VSPYHIGAWAYVYTIGYRPDLT---PKNINFSSWADLWNPE-LKGMLAAPDFDPSHIIAV 172

Query: 168 ALLADGVSPDKLYPLDLDRAFKKLDTIKSDI-IWWSGGAQSQQLLASAEAPFGSVWNGRM 226
           + L  G SP      D  +  +KL  +K +   +++  A SQQL+A+ E P   + +   
Sbjct: 173 SALLAGGSP-----ADWQKGEQKLLALKPNFKAFYTNDANSQQLIATGETPVQIMLSMNA 227

Query: 227 TALAQSGINVET--SWEQNITAADALVVPKGSRNKEAAMQFIALATSPEAQADLAKITGY 284
             +   G+ ++     E  +   D + + KGS+N+E A +FI  A  PE Q  +A++   
Sbjct: 228 YYMIAQGVPIKLVIPKEGGVLGIDTMAIMKGSKNRELAEKFINTALDPEVQGKIAELKKG 287

Query: 285 AP 286
           +P
Sbjct: 288 SP 289