Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 364 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 55.8 bits (133), Expect = 2e-12
 Identities = 68/280 (24%), Positives = 115/280 (41%), Gaps = 27/280 (9%)

Query: 46  FTEKTGINVLQDGPTDYGKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVIDK 105
           F + +GI  + D       L+  + A    +DVV     +  +  K G  +KLD S++  
Sbjct: 45  FEKASGIKPVYDVFDSNETLEGKLLAGRTGYDVVVPSNHFLGKQIKAGAFQKLDKSLLTN 104

Query: 106 -SKLDPRFV---------TDYSVGSFYYSFVIGCNKD------AVDACPKTWADLFDAQ- 148
            + LDP  +           Y+V   + +  IG N D       VD    +WA LF+ + 
Sbjct: 105 YANLDPALLKRLEKNDPGNQYAVPYLWGTNGIGYNGDKGKEVLGVDHID-SWAVLFEPEN 163

Query: 149 --KFPGMRAFYKWSAPGVIEAALLADGVSPDKLYPLDLDRAFKKLDTIKSDIIWWSGGAQ 206
             K       +  SA  ++ A L   G++P+   P D  +A +KL  ++  + ++     
Sbjct: 164 MKKLATCGVSFMDSADEMLPAVLNYMGLNPNSTNPDDYKKAEEKLLKVRPYVTYFHSSKY 223

Query: 207 SQQL----LASAEAPFGSVWNGRMTAL-AQSGINVETSW--EQNITAADALVVPKGSRNK 259
              L    +  A    G V+  +  A  A  G+N+  +   E      D L +PK + N 
Sbjct: 224 ISDLANGNICVAAGFSGDVFQAKARAAEAGKGVNIAYTIPKEGGNLWFDVLAIPKDATNV 283

Query: 260 EAAMQFIALATSPEAQADLAKITGYAPINLDSPKMMDPEL 299
           + A  FI     PE  A ++   GYA  N  + K+M+  +
Sbjct: 284 KEAHAFINYLLQPEVIAQVSDYVGYANPNPGADKLMEQSI 323