Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 346 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  179 bits (454), Expect = 9e-50
 Identities = 115/344 (33%), Positives = 178/344 (51%), Gaps = 17/344 (4%)

Query: 4   IFVLAATAATIATAMPATAADLVFTSWGGTTQDAQ-KIAWAEKFTEKTGINVLQDGPTDY 62
           +  L+   AT A A P    DL   S+GG  + AQ K  +A   +   G  V  +   + 
Sbjct: 9   VLALSLMGATQAMAGP----DLTVVSFGGANKAAQVKAFYAPWESAGNGKIVAGEYNGEM 64

Query: 63  GKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVI-DKSKLDPRFVTDYSVGSF 121
            K+KAMV+  +V+WD+V+VE    ++   + + E LD  +  + +      +    VG F
Sbjct: 65  AKVKAMVDTKSVSWDLVEVESPELSRGCDEDMFEPLDPKLFGNTADYVKGAIQPCGVGFF 124

Query: 122 YYSFVIGCNKDAVDACPKTWADLFDAQKFPGMRAFYKWSAPGVIEAALLADGVSPDKLYP 181
            +S V+  N D + + P +WAD +D +KFPG R   K  A   +E AL+ADGV+P  +Y 
Sbjct: 125 VWSTVLAYNADKLASAPTSWADFWDTKKFPGKRGLRK-GAKYTLEFALMADGVAPKDVYK 183

Query: 182 L-----DLDRAFKKLDTIKSDIIWWSGGAQSQQLLASAEAPFGSVWNGRMTALAQSGINV 236
           +       DRAFKKLD +K  I WW  GAQ  Q LAS +    S +NGR+ A+ Q   N+
Sbjct: 184 VLAGKDGQDRAFKKLDELKPSIQWWEAGAQPPQYLASGDVVMSSAYNGRIAAV-QKESNL 242

Query: 237 ETSWEQNITAADALVVPKG--SRNKEAAMQFIALATSPEAQADLAKITGYAPINLDSPKM 294
           +  W   I   DA  +PKG      EAA +FIA +  P+ Q   ++   Y P N  +  +
Sbjct: 243 KVVWNGGIYDFDAWAIPKGLAKDRAEAAKKFIAFSVQPQQQKTYSENIAYGPANTQAVPL 302

Query: 295 MDPELANTLPDA--QTASQVNADMNYWAENRDAIGERWYAWQAK 336
           +  ++   +P      A+QV  D+++WA+N + + +R+ +W AK
Sbjct: 303 LAKDVLKDMPTTPENIANQVQIDVSFWADNGEQLEQRFNSWAAK 346