Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 359 a.a., spermidine/putrescine ABC transporter periplasmic protein from Sinorhizobium meliloti 1021

 Score = 53.1 bits (126), Expect = 1e-11
 Identities = 79/331 (23%), Positives = 126/331 (38%), Gaps = 32/331 (9%)

Query: 3   RIFVLAATAATIATAMPATAA----DLVFTSWGGTTQDAQKIAWAEKFTEKTGINVLQ-- 56
           R  + A  A     AMPA        L    +GG  +D+       +FT+ TGI +    
Sbjct: 9   RTLLGAGLAGASMLAMPAVLRAQDKSLKVGVYGGYFKDSFDKNIFPEFTKATGIAIESVA 68

Query: 57  --DGPTDYGKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVIDK-SKLDPRFV 113
              G     +L+    A     DV  +      +     L   +D + I   S L  RFV
Sbjct: 69  EPTGEAWLVQLEQAARAGQAPADVSMMSQVAMLKGQATDLWTPIDMAKIKNGSNLLDRFV 128

Query: 114 TDY------SVGSFYYSFVIGCNKDAVDACPKTWADLFD---AQKFPGMRAFYKWSAPGV 164
             Y       +G+  +   +  N D     P +W   +D   A K  G+ A    S    
Sbjct: 129 NKYPDGRIAGIGAVSWYITLVTNTDVYKEAPTSWQAFWDPANADKL-GLLALVSNSFLLE 187

Query: 165 IEAALLADGVSPDKLYPLDLD----RAFKKLDTIKSDI-IWWSGGAQSQQLLASAEAPFG 219
           + A     G +      LD +    + F+KL  +K ++ +W+   AQ +Q L S E P G
Sbjct: 188 VTAKTFMGGTNA-----LDTEEGILKTFEKLAEVKPNVRLWYRDEAQFEQALKSGEIPMG 242

Query: 220 SVWNGRMTALAQSGINVETSW--EQNITAADALVVPKGSRNKEAAMQFIALATSPEAQAD 277
             ++      A  G  V +++  E  I  +    + + S+  E A  FI     P  QA 
Sbjct: 243 QYYHDVTGLAAADGHPVRSTFPKEGGIQDSGCWALSRASQKVEEAHIFIDYMCQPAVQAT 302

Query: 278 LAKITGYAP-INLDSPKMMDPELANTLPDAQ 307
           L++  G +P +  +S  + D E A    D +
Sbjct: 303 LSRKVGTSPTVKRESTDLTDKEFAAVSSDIE 333