Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 367 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 43.1 bits (100), Expect = 1e-08
 Identities = 66/315 (20%), Positives = 120/315 (38%), Gaps = 28/315 (8%)

Query: 46  FTEKTGINVLQDGPTDYGKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVIDK 105
           F + +G+ ++ D       L+A +      +DVV     + A+  + G+ + LD S +  
Sbjct: 47  FQKDSGVKLVYDIFDTNEALEAKLLTGNSGYDVVVPSNVFLAKQIEAGVFQPLDRSKLPN 106

Query: 106 -SKLDPRFV---------TDYSVGSFYYSFVIGCNKDAVDAC------PKTWADLFDAQK 149
              LDP  +           ++V   Y + +IG N   V A         +W  +F  + 
Sbjct: 107 WQHLDPALMKLIEANDPGNKFAVPYMYGTVLIGFNPAKVKAALGDNAPVDSWDLIFKEEN 166

Query: 150 FPGMR---AFYKWSAPGVIEAALLADGVSPDKLYPLDLDRAFKKLDTIKSDIIWWSGGAQ 206
              ++        S   ++  AL   G+ P+   P D  +A + +  I+  I ++     
Sbjct: 167 IAKLKQCGVALLDSPSEILPLALQYLGLPPNSDKPADYKKAEELMLKIRPHITYFHSSKY 226

Query: 207 SQQLLASAEAPFGSVWNGRMTALAQ------SGINVETSWEQNITAA--DALVVPKGSRN 258
              + A+ +      ++G  +  A       +G+ V+    +       D L +PKG+ N
Sbjct: 227 MADI-ANGDICVAVGYSGSFSQAANRAREANNGVVVDMRLPKEGAPIWFDMLAIPKGAAN 285

Query: 259 KEAAMQFIALATSPEAQADLAKITGYAPINLDSPKMMDPELANTLPDAQTASQVNADMNY 318
            E A  FI     PE  A ++   GY   N D+   ++P + N      TA  +      
Sbjct: 286 PEDAHTFINYLLRPEVIAPISDFVGYPNPNKDATDKVNPTIRNNPNLYPTAEAMAKLYTL 345

Query: 319 WAENRDAIGERWYAW 333
               R+A   R  AW
Sbjct: 346 KPLTRNAERARTRAW 360