Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 364 a.a., spermidine/putrescine ABC transporter - periplasmic subunit from Pseudomonas putida KT2440

 Score = 62.4 bits (150), Expect = 2e-14
 Identities = 80/319 (25%), Positives = 133/319 (41%), Gaps = 36/319 (11%)

Query: 6   VLAATAATIATAMPATAADLVFTSWG---GTTQDAQKIAWAEKFTEKTGINVLQDGPTDY 62
           ++A    T+A ++ A A  + F +W    G T  A        F + TGI  +QD     
Sbjct: 10  LMAGAGLTLACSVQA-APTVHFYNWSDYIGPTTLAD-------FEKATGIKPVQDVFDSN 61

Query: 63  GKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVIDK-SKLDPRFV-------- 113
             L+  + A    +DVV     +  +  K G  +KLD +++   S LDP  +        
Sbjct: 62  ETLEGKLLAGNTGYDVVVPSNHFLGKQIKAGAFQKLDKNLLPNYSNLDPALMKRLEKNDP 121

Query: 114 -TDYSVGSFYYSFVIGCNKDAVDACP-----KTWADLFDAQ---KFPGMRAFYKWSAPGV 164
              Y+V   + +  IG N D V A        +WA LF+ +   K       +  SA  +
Sbjct: 122 GNQYAVPYLWGTNGIGYNVDKVKAALGVDTIDSWAVLFEPENMKKLSKCGVAFLDSADEM 181

Query: 165 IEAALLADGVSPDKLYPLDLDRAFKKLDTIKSDIIWWSGGAQSQQL----LASAEAPFGS 220
           + A L   G++P+   P D  +A +KL  ++  + ++        L    +  A    G 
Sbjct: 182 LPAVLNYMGLNPNSTDPKDYAKAEQKLLAVRPYVTYFHSSKYITDLANGDICVAAGFSGD 241

Query: 221 VWNGRMTAL-AQSGINVETSW--EQNITAADALVVPKGSRNKEAAMQFIALATSPEAQAD 277
           V+  +  A  A+ G+N+  +   E      D L +PK ++N + A  FI     PE  A 
Sbjct: 242 VFQAKARAEEAKKGVNLAYAIPKEGGNLWFDVLAIPKDAKNVKEAHAFINYLLKPEVIAQ 301

Query: 278 LAKITGYAPINLDSPKMMD 296
           ++   GYA  N  +  +MD
Sbjct: 302 VSDYVGYANPNPKAGALMD 320