Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 362 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score = 57.8 bits (138), Expect = 4e-13
 Identities = 82/330 (24%), Positives = 128/330 (38%), Gaps = 36/330 (10%)

Query: 1   MNRIFVLAATAATIATAMPATAADLV----FTSWGGTTQDAQKIAWAEKFTEKTGINVLQ 56
           M  +  L   A T+  A    AA  V    +T + G T  A        F   +GI V+ 
Sbjct: 1   MRHLQALIPAAFTLLFATTTQAAPTVSVYNWTDYIGDTTLAD-------FQASSGIKVVY 53

Query: 57  DGPTDYGKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVIDK-SKLDPRFV-- 113
           D       L+  + A    +DVV     + A+  + G    LD S +     LDP+ +  
Sbjct: 54  DVFDSNETLEGKLLAGRTGYDVVVPSNHFLARQAQAGAFLPLDRSKLPNWQHLDPKLLKQ 113

Query: 114 -------TDYSVGSFYYSFVIGCNKDAVDACP-----KTWADLFDAQKFPGMR---AFYK 158
                    Y+V   + +  IG N D V A        +WA LF+ +    ++     + 
Sbjct: 114 LEQNDPGNQYAVPYLWGTNGIGYNVDKVKAALGVDHIDSWAVLFEPENLKKLKQCGVAFM 173

Query: 159 WSAPGVIEAALLADGVSPDKLYPLDLDRAFKKLDTIKSDIIWWSGGAQSQQL----LASA 214
            S   +  A L   G+ P    P D  +A  +L  ++  I ++        L    +  A
Sbjct: 174 DSPDELFPAVLNYLGMDPRSEKPGDYAKAEARLLELRPYITYFHSSKYVSDLANGDVCIA 233

Query: 215 EAPFGSVWNGRMTAL-AQSGINVETSW--EQNITAADALVVPKGSRNKEAAMQFIALATS 271
               G V+     A+ A++G+ V  S   E +    D L +PK + N E A+ FI     
Sbjct: 234 FGYSGDVFQAANRAVEAKNGVKVAYSIPKEGSNLWFDLLAIPKDANNPEQALAFINYLLD 293

Query: 272 PEAQADLAKITGYAPINLDSPKMMDPELAN 301
           P+  A ++   GYA  N D+   MD  L N
Sbjct: 294 PKVIAKVSATVGYANANPDAKAYMDASLVN 323