Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 347 a.a., putative spermidine/putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  166 bits (419), Expect = 1e-45
 Identities = 101/343 (29%), Positives = 165/343 (48%), Gaps = 10/343 (2%)

Query: 3   RIFVLAATAATIATAMPATAADLVFTSWGGTTQDAQKIAWAEKFTEKTGINVLQDGPT-D 61
           R+  L A    +  +    A  +V   +GG  Q AQ  A  + F  + G  ++Q     +
Sbjct: 6   RVTGLCAALLALGLSNAQAAQQMVVVGYGGAGQKAQDEAIFKPFVAQDGSQLIQSEYNGE 65

Query: 62  YGKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVIDKS-KLDPRFVTDYSVGS 120
             +++ M +   V WDVV +EG    +   +G+ E+LD+  +  + +L P    D    +
Sbjct: 66  MARIQVMADTGNVDWDVVQIEGPDLMRGCDEGIYERLDWQRLGHAAELIPAAAQDCGSAA 125

Query: 121 FYYSFVIGCNKDAVDACPKTWADLFDAQKFPGMRAFYKWSAPGVIEAALLADGVSPDKLY 180
             +S  I  ++  +   P +WAD +D  K+PG R   K +    +E ALLADGV  + +Y
Sbjct: 126 LVWSVAIAYDRSKLAQAPASWADFWDVDKYPGKRGLRKRAVYN-LEFALLADGVKVEDVY 184

Query: 181 -----PLDLDRAFKKLDTIKSDIIWWSGGAQSQQLLASAEAPFGSVWNGRMTALAQSGIN 235
                P  ++RAF KL  +K  I WW  GAQ  Q LA+ +    S ++GR+   AQ G  
Sbjct: 185 RVLSTPAGVERAFAKLSELKPHIQWWDAGAQPAQWLAAGDVVMTSTYSGRIAVAAQQGSP 244

Query: 236 VETSWEQNITAADALVVPKGSRNKEAAMQFIALATSPEAQADLAKITGYAPINLDSPKMM 295
           +   W  ++   D   + KGSR+ + A + IA A  P+ Q    +   Y P N  +   +
Sbjct: 245 LAVVWPGSLYGMDYWAIIKGSRHVDQAKRLIAYANQPDTQVRYVQQIPYGPTNTQAAARL 304

Query: 296 DPELANTLPDAQTASQVNADMN--YWAENRDAIGERWYAWQAK 336
           DP LAN +P +    Q    MN  +W ++ + + +R+ AW +K
Sbjct: 305 DPALANWVPTSPQNLQGALAMNVEFWVDHGEELEQRFNAWASK 347