Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 348 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Escherichia coli ECRC100

 Score =  107 bits (268), Expect = 3e-28
 Identities = 95/326 (29%), Positives = 151/326 (46%), Gaps = 44/326 (13%)

Query: 11  AATIATAMPATAAD----LVFTSWGGTTQDAQKIAWAEKFTEKTGINVL----QDGPTDY 62
           A  +A  M A  AD    L F +W     +       E+FT++TGI V+    +   T Y
Sbjct: 11  AGALALGMSAAHADDNNTLYFYNW----TEYVPPGLLEQFTKETGIKVIYSTYESNETMY 66

Query: 63  GKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVIDK-SKLDPRFVT------- 114
            KLK   +     +D+V     Y  +  K+G+++K+D S +   S LDP  +        
Sbjct: 67  AKLKTYKDG---AYDLVVPSTYYVDKMRKEGMIQKIDKSKLTNFSNLDPDMLNKPFDPNN 123

Query: 115 DYSVGSFYYSFVIGCNKDAVDACPKT-WADLFDAQKFPGMRAFYKWS------APGVIEA 167
           DYS+   + +  IG N DAVD    T WADL+  +        YK S      A  V + 
Sbjct: 124 DYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPE--------YKGSLLLTDDAREVFQM 175

Query: 168 ALLADGVSPDKLYPLDLDRAFKKLDTIKSDIIWWSGGAQSQQLLASAEAPFGSVWNGRMT 227
           AL   G S +   P +++ A+ +L  +  ++  ++    +   +   E   G +WNG   
Sbjct: 176 ALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPYM-EGEVNLGMIWNGSAF 234

Query: 228 ALAQSGINVETSW--EQNITAADALVVPKGSRNKEAAMQFIALATSPEAQADLAKITGYA 285
              Q+G  ++  W  E  I   D+L +P  ++NKE A++ I     P+    +A+  GY 
Sbjct: 235 VARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLINFLLRPDVAKQVAETIGYP 294

Query: 286 PINLDSPKMMDPELAN--TL-PDAQT 308
             NL + K++ PE+AN  TL PDA+T
Sbjct: 295 TPNLAARKLLSPEVANDKTLSPDAET 320