Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 369 a.a., Spermidine-binding periplasmic protein SpuE from Azospirillum sp. SherDot2

 Score = 52.8 bits (125), Expect = 1e-11
 Identities = 84/354 (23%), Positives = 140/354 (39%), Gaps = 41/354 (11%)

Query: 6   VLAATAATIATAMP----ATAADLVFTSWGGTTQDAQKIAWAEKFTEKTGINVLQDG-PT 60
           V  A AA  A   P    A +  L    +GG  +D+        FT+ TGI V     PT
Sbjct: 22  VATAAAAVGAVGFPSIVRAQSKSLKVGVYGGYFKDSFDKHIFPDFTKATGIAVEAVAEPT 81

Query: 61  DYGKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVIDKSKLD------PRFVT 114
               L  + +A        DV    +  A  KG+  +L ++ +D ++L       P  + 
Sbjct: 82  GEAWLIQLEQAARAKQAPADVSM-MSQVAMLKGMAAEL-WAPLDPARLPNAAKVKPALMN 139

Query: 115 DY------SVGSFYYSFVIGCNKDAVDACPKTWADLFDAQKFP--GMRAFYKWSAPGVIE 166
            Y       +G+  +   +  N  +    P++WA L+D       G+ A    S    + 
Sbjct: 140 KYPDGRLSGIGAVSWYITLVTNTKSYPQAPESWATLWDPANKDKLGLLALVSNSFLLDVT 199

Query: 167 AALLADGVSPDKLYPLDLD------RAFKKLDTIKSDI-IWWSGGAQSQQLLASAEAPFG 219
           AA    G       P  LD        FKKL  +K+++ +W+   AQ +  L S E P G
Sbjct: 200 AATFFGG-------PKHLDSEQGQLECFKKLAELKNNVKLWYRDEAQFEAALKSGEVPMG 252

Query: 220 SVWNGRMTALAQSGINVETSW--EQNITAADALVVPKGSRNKEAAMQFIALATSPEAQAD 277
             ++      A  G  V +++  E  I  + +  V K S+  + A  FI     P+ QA 
Sbjct: 253 QYYHDVTGLAAADGHPVRSTFPKEGGILDSGSWAVSKASKAADLAHVFIDYMCQPQIQAL 312

Query: 278 LAKITGYAP-INLDSPKMMDPELANTLPDAQTASQVNADMNYWAENRDAIGERW 330
           L++  G +P I+  +  + D E A    D    + +    + +    D + ++W
Sbjct: 313 LSRKVGTSPTIDRSATDLTDKEFAAVSSD---LAPIVPRYDLYVSKADWLNQKW 363