Pairwise Alignments

Query, 336 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 365 a.a., ABC transporter, substrate binding protein (putrescine) from Agrobacterium fabrum C58

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 71/316 (22%), Positives = 125/316 (39%), Gaps = 30/316 (9%)

Query: 44  EKFTEKTGINVLQDGPTDYGKLKAMVEANAVTWDVVDVEGDYAAQAGKKGLLEKLDFSVI 103
           E FT++TGI V+ D       L+  + A +  +DVV     + A+  K G+ +KLD S +
Sbjct: 44  EDFTKETGIKVVYDVYDGNEVLETKLLAGSSGYDVVAPTSPFLARQIKAGVYQKLDKSKL 103

Query: 104 DK------------SKLDP--RFVTDYSVGSFYYSFVIGCNKDAVDACP-KTWADLF--- 145
                         +K DP   +  +Y  G+    + +   K A+   P  +W  LF   
Sbjct: 104 PNLKNAWPDITERLAKYDPGNEYAVNYMWGTTGIGYNVAKVKAALGDVPVDSWDVLFKPE 163

Query: 146 DAQKFPGMRAFYKWSAPGVIEAALLADGVSPDKLYPLDLDRAFKKLDTIKSDIIWWSGGA 205
           +A+K          ++      A+   G +PD     DL+   +    I+  +  ++   
Sbjct: 164 NAEKLKSCGINILDASDETFAIAMNYLGKNPDSKETADLEAGGEVYSKIRPYVKTFNSSP 223

Query: 206 QSQQLLASAEAPFGSVWNGRM----TALAQSGINVETSW----EQNITAADALVVPKGSR 257
               L A+ +      W+G +    T   ++   VE ++    E      D+  +P  ++
Sbjct: 224 YINDL-ANGDTCISIGWSGDILQAKTRAEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAK 282

Query: 258 NKEAAMQFIALATSPEAQADLAKITGYAPINLDSPKMMDPELA---NTLPDAQTASQVNA 314
           N + A  FI     PE  A  +    YA  NL S  +MDP +A      PD +T  ++  
Sbjct: 283 NVDEAHAFINYMMKPEVAAKASDYVQYANGNLPSQALMDPSVAKNPGVYPDPETMKKLFT 342

Query: 315 DMNYWAENRDAIGERW 330
              Y  + +  +   W
Sbjct: 343 ISPYGPKEQRVLNRVW 358