Pairwise Alignments

Query, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

Subject, 347 a.a., no description from Variovorax sp. SCN45

 Score =  105 bits (262), Expect = 2e-27
 Identities = 78/288 (27%), Positives = 126/288 (43%), Gaps = 5/288 (1%)

Query: 7   DLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGRELIPTPRA 66
           DLNLL  +  L   R +T AA  + +SQ   S+A+ARLR   GD LF      + PTPRA
Sbjct: 13  DLNLLRVVVTLGNTRSVTHAAAALGMSQSGFSSALARLRQLCGDPLFVRTASGMSPTPRA 72

Query: 67  EALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLAREAPGV 126
           E +    R  L  +   V+     + A +   FR+ ++D   +VF  R++      AP  
Sbjct: 73  ERMVATARSVLAQVAEGVLGQPEFDAATTRTEFRLAMADVAEIVFLPRLLRHFQVHAPHA 132

Query: 127 SFELLPLDDDP-YELLRRGDVDFLV--LPDLFMSSAHPKAKLFAEALVCVGCPTNEQLLG 183
               + L + P  + +  G++D  +   PDL   S   + +L+     C+    +     
Sbjct: 133 RVVCVTLPNGPLQQAMASGEIDLALGYFPDLNAQSFF-RQRLYVHTYACMVRKGHPLEGS 191

Query: 184 ELSFEKYMSMGHVAAQFGRALKPSFEQWLLLEHGFKRRVELVVPGFTLIPPLLPHTNRIA 243
            L+ + Y++ GH A     A    F    L   G +RR+ L       +P ++  T+ +A
Sbjct: 192 RLTQKAYLNHGH-ADVASPARSNEFFDKFLTRRGLQRRIVLSTQHHMSLPAIIEATDLLA 250

Query: 244 IIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWMR 291
            +PL     F Q   ++++  P  P  F     W  L + D  N W+R
Sbjct: 251 TVPLATGARFAQLGAVQLLGLPFQPPTFAVQAHWHRLVHHDARNRWLR 298