Pairwise Alignments

Query, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

Subject, 304 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  120 bits (301), Expect = 4e-32
 Identities = 92/302 (30%), Positives = 151/302 (50%), Gaps = 14/302 (4%)

Query: 1   MRFRGLDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGREL 60
           ++ + +DLNLL+  D ++ E++++A A  + LSQPA+S A+ARLR   GDELF    R +
Sbjct: 1   VQLKDIDLNLLLVFDRMLAEKRVSAVAESLGLSQPAISNALARLRKLLGDELFLRTARGM 60

Query: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLA 120
            PTP A  LA  V  A+  +  ++      +PA S R F + ++D   + F  +++E L+
Sbjct: 61  EPTPFALQLAEPVAYAMGALHTALNQQVVFDPATSTRSFTLAMTDIGEIYFTPKLMEALS 120

Query: 121 REAPGVSFELLPLD--DDPYELLRRGDVDFLV--LPDLFMSSAHPKAKLFAEALVCVGCP 176
             APGV+   L  +   +  + L  G VD  +  LP L   +   + +LF +  VC+   
Sbjct: 121 VAAPGVTVSTLRNNTATNLRDELEAGHVDIAIGLLPQL--KAGVFQRRLFLQQYVCLFSQ 178

Query: 177 TNE-QLLGELSFEKYMSMGHV---AAQFGRALKPSFEQWLLLEHGFKRRVELVVPGFTLI 232
            +       +S + + +  HV   AA  G          ++   G +RR++L VP F  I
Sbjct: 179 AHPLAKKRSVSLKDFSAADHVQVLAAGTGHGKADD----VMAAQGIQRRIKLRVPHFVAI 234

Query: 233 PPLLPHTNRIAIIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWMRE 292
             +L  ++ IA +P RL +   +   L    HP+        + W A  ++DPGN WMR 
Sbjct: 235 GHILHSSHMIATVPERLAQSIAEPFGLVWRPHPVALPQIAINLFWHAKAHRDPGNQWMRG 294

Query: 293 IL 294
           +L
Sbjct: 295 VL 296