Pairwise Alignments

Query, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

Subject, 311 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  125 bits (313), Expect = 2e-33
 Identities = 95/302 (31%), Positives = 140/302 (46%), Gaps = 19/302 (6%)

Query: 4   RGLDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGRELIPT 63
           R LD+ +L   DALM ER ++ AA R+ LSQPA+SA++ RLR  FGD LF+   R + PT
Sbjct: 7   RSLDVGMLRTFDALMRERSVSRAATRLFLSQPAVSASLNRLRDTFGDPLFTRTARGVEPT 66

Query: 64  PRAEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLAREA 123
            RA ALA  V   L  +   +   +  +PA S R FRI   D+ + +    +   L    
Sbjct: 67  ARAHALAGQVERVLADLSAMLEPGEGFDPAASQRIFRISGGDYASHLLLPTLANELVACG 126

Query: 124 PGV-------SFELLPLDDDPYELLRRGDVDFLVLPDLFMSSAHPKAKLFAEALVCVGCP 176
             V       SF  L       E LR+GD D  VLP L   S    A L+ +  V     
Sbjct: 127 SRVRIYWETSSFLTLT------ERLRKGDFDIAVLPRLQPPSDCESALLYEDRYVVAVRR 180

Query: 177 TNEQLLGELSFEKYMSMGHVAAQFGRALKPSFEQWLLLEHGFKRRVELVVPGFTLIPPLL 236
            +  L  E + + +    HV   +G +        +L   G  R + + +  F  I  LL
Sbjct: 181 GHPTLGREATLDAFCGAPHVFLGYGSSALDDLIDQVLARLGRTRTMSVAMTSFGQIVDLL 240

Query: 237 PHTNRIAIIPLRLVKYFEQTIPLRIVKHPLP--PLWFTEAVQWPALHNKDPGNIWMREIL 294
             T+ +A++PLR+ + F   + +    HPLP     +   V W    N D G +W+++ L
Sbjct: 241 AQTDHVAVMPLRVAERFRDVLAV----HPLPFELQGYRSVVCWNRRSNSDAGVLWLKDAL 296

Query: 295 LQ 296
           L+
Sbjct: 297 LR 298