Pairwise Alignments

Query, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

Subject, 328 a.a., LysR family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  124 bits (312), Expect = 2e-33
 Identities = 96/302 (31%), Positives = 143/302 (47%), Gaps = 8/302 (2%)

Query: 4   RGLDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGRELIPT 63
           R  DLNLLVA DA+M E  +T AA+R+K+ QPAMS  I+ LRT F DELF   G+ + PT
Sbjct: 21  RSFDLNLLVAFDAMMEEMSVTRAAQRLKIQQPAMSHNISTLRTLFQDELFIRVGQVMKPT 80

Query: 64  PRAEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLAREA 123
            RA  L+  VR AL   Q +V+  D  +PA   R FR+ LS  + L+    +  RL   A
Sbjct: 81  ARALNLSGPVRQALRQAQAAVLMADVFDPATEQRTFRLGLSSEVELLLLPDLTARLRDIA 140

Query: 124 PGVSFELLPLDDDPYE---LLRRGDVDFLVLPDLFMSSAHPKAKLFAEALVCVGCPTNEQ 180
           PG+   +L    D  E   +L  G +D  V       S H    L+  +++C   P   +
Sbjct: 141 PGI--RILARGGDAAEVDAMLDAGVIDLSVGCSYLPDSRHHCEPLYQSSVLCCFNPQLLE 198

Query: 181 LLGELSFEKYMSMGHVAAQFGRALKPSFEQWLLLEH-GFKRRVELVVPGFTLIPPLLPHT 239
           +   +S + YM+  H       +L    +    LEH G +  V    P F  I      +
Sbjct: 199 ISNPVSLDAYMAAQHAVISQTDSLHGCVKD--ALEHAGAELEVVAAAPDFMSILATARSS 256

Query: 240 NRIAIIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWMREILLQEAS 299
             IA +  R+   +   + L++   PL   +   A+ WP   + D G  W+R+ + +   
Sbjct: 257 AVIATVSSRIAARYGPLLGLQVSPVPLALSFPPVAMVWPLHMDSDLGCAWLRQQIREAML 316

Query: 300 RS 301
           R+
Sbjct: 317 RT 318