Pairwise Alignments

Query, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

Subject, 304 a.a., Transcriptional regulator MexT from Pseudomonas putida KT2440

 Score =  113 bits (282), Expect = 6e-30
 Identities = 89/301 (29%), Positives = 138/301 (45%), Gaps = 29/301 (9%)

Query: 4   RGLDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGRELIPT 63
           R +DLNLL+  + LM ER +T AA ++ L QPA+SAA++RLR  F D LF   GR + P+
Sbjct: 7   RRVDLNLLIVFETLMHERSVTRAAEKLFLGQPAISAALSRLRNLFDDPLFVRTGRSMEPS 66

Query: 64  PRAEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLAREA 123
            RA  +   +  AL  I  +V      +PA S+  FRI LSD        ++++R+  EA
Sbjct: 67  ARAHEIFALLSPALDSISTAVSRAAEFDPATSNAVFRIGLSDDAEFALLPQLLKRIRAEA 126

Query: 124 PGVSFELLPLDDDPYELLRRGDVDFLVLPDLFMSS-------------AHPKAKLFAEAL 170
           PG+             ++RR  V++L++P L  S              A+ K K+   ++
Sbjct: 127 PGIVL-----------VVRR--VNYLLMPTLLASGEISVGVSYTSELPANAKRKVLRRSM 173

Query: 171 VCVGCPTNEQLLGELSFEKYMSMGHVAAQFGRALKPSFEQWLLLEHGFKRRVELVVPGFT 230
             +     + + G ++ + + +  H    F   L   F    L + G KR V L VP F 
Sbjct: 174 PKL--LRADSVPGSITLDDFCARPHALVSFAGDLS-GFIDEALEDIGRKRHVVLAVPQFN 230

Query: 231 LIPPLLPHTNRIAIIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWM 290
            +  LL  T+ +A +P            LR    P+P   F   + W    + DP   W+
Sbjct: 231 GLGSLLAGTDIVATVPDYTADALTAAGGLRAEDLPIPVRSFELHMAWRGAQDNDPAERWL 290

Query: 291 R 291
           R
Sbjct: 291 R 291