Pairwise Alignments

Query, 310 a.a., NodD2 nod box-dependent transcription activator from Sinorhizobium meliloti 1021

Subject, 320 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  152 bits (384), Expect = 1e-41
 Identities = 107/301 (35%), Positives = 152/301 (50%), Gaps = 8/301 (2%)

Query: 1   MRFRGLDLNLLVALDALMTERKLTAAARRVKLSQPAMSAAIARLRTYFGDELFSMQGREL 60
           M  R LDLNLL+ LD L  E+ L+AAARR+ +SQP  SA++ RLR YF D+LF   GR +
Sbjct: 1   MDIRRLDLNLLLLLDELYREQNLSAAARRLGMSQPMASASLRRLREYFEDQLFLSTGRGM 60

Query: 61  IPTPRAEALAPAVRDALLHIQLSVIAWDPINPAQSDRRFRIILSDFMTLVFFERVVERLA 120
            PTP   ++A +V   L  I+  ++A     P QSDR F I  SD   L+F   ++ RL 
Sbjct: 61  RPTPFTVSIAASVSGVLERIKHEILAKPAFQPRQSDRLFTISTSDIGALIFVPPILRRLG 120

Query: 121 REAPGVSFELLPLDDDPYE-LLRRGDVDFLV--LPDLFMSSAHPKAKLFAEALVCVGCPT 177
            +AP      + L     E  L +G VD  V   PDL       +A LF     C+    
Sbjct: 121 EDAPNTDLRCVSLPHQQLEQALEQGSVDLAVGYFPDLQGEQVKTQA-LFEHNFTCIVRRN 179

Query: 178 NEQLLGELSFEKYMSMGH-VAAQFGRALKPSFEQWLLLEHGFKRRVELVVPGFTLIPPLL 236
           +  +   LS E++++  H V  Q GR+ +  FEQ  L E   +RRV L VP F  +P L+
Sbjct: 180 HPSIGDTLSLEQFLAADHLVVNQEGRS-QEIFEQ-RLRELKLQRRVHLEVPHFMSVPQLI 237

Query: 237 PHTNRIAIIPLRLVKYFEQTIPLRIVKHPLPPLWFTEAVQWPALHNKDPGNIWMREILLQ 296
             TN +A +PL L  +F     ++++  P+    F   + W      DP   W R  + +
Sbjct: 238 ASTNMVATVPLSLGVWFASE-QIKMLTPPIEVEKFELKLHWHRQMEDDPAVSWFRNAVFE 296

Query: 297 E 297
           E
Sbjct: 297 E 297