Pairwise Alignments

Query, 67 a.a., CspA6 cold shock protein transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 276 a.a., Cold shock protein of CSP family => dimer from Sphingobium sp. HT1-2

 Score = 60.8 bits (146), Expect = 7e-15
 Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 3/65 (4%)

Query: 2   ATGTVKFFAQDKGFGFITPDNGGPDVFVHISALGFG--GSLQDGQKVSYELGQDRKTGKS 59
           A+GTVKFF   KGFGFI  D+G PD FVHISA+     G+L +G ++ +EL  DR+ GK 
Sbjct: 208 ASGTVKFFNAMKGFGFIQRDDGQPDAFVHISAVERAGMGALNEGDRLDFELEVDRR-GKY 266

Query: 60  KAENV 64
            A N+
Sbjct: 267 AAVNL 271



 Score = 52.0 bits (123), Expect = 3e-12
 Identities = 27/49 (55%), Positives = 32/49 (65%), Gaps = 2/49 (4%)

Query: 4   GTVKFFAQDKGFGFITPDNGGPDVFVHISALGFGG--SLQDGQKVSYEL 50
           G VKFF   KGFGFI  D+GG DVFVHISA+   G   L +GQ + + L
Sbjct: 106 GVVKFFNGQKGFGFIVRDDGGEDVFVHISAVEQAGLTGLAEGQPLGFTL 154