Pairwise Alignments

Query, 569 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 515 a.a., Transcriptional regulator, IclR family from Variovorax sp. SCN45

 Score =  232 bits (591), Expect = 3e-65
 Identities = 179/549 (32%), Positives = 259/549 (47%), Gaps = 47/549 (8%)

Query: 22  LAKGLALLDLIAEAPKPLRFADLQKMSGVPKPTLARMLKTLMVFRLIRQDETTGAYLLGH 81
           L K L +L+ +  AP+ L   +L     +P+ T+ R+L TL+   L+R+D+    Y LG 
Sbjct: 1   LEKALDVLEAVGAAPEGLSQTELADRLAIPRTTVYRLLATLVTRGLLRRDQLRKVYCLGF 60

Query: 82  RFVELSHRVWDKFDLVSAAIPELDRLASELGETVALCRLDGQRVVYLEE-------RSSG 134
           R  E++ + +   DLV+AA  EL  L    GET  L  LDG+ V+ LE        RS  
Sbjct: 61  RCFEMARQAYAMPDLVAAAAIELRTLRDLTGETSYLAALDGREVISLERCDGAHSRRSQA 120

Query: 135 GLGVLIEVGRRVPVHCTAAGKVLLAFQEPSFARSLAGQITYDRFTPNTITDSQALEADLV 194
            LG      +R P+HCT+ GK +L+  + S   +L  ++     T +TITD + L+A+L 
Sbjct: 121 ALG------QRKPIHCTSQGKAILSVLDESAREALIRELNLKPLTQHTITDRRRLQAELK 174

Query: 195 LTRARGYAVSYEEHLAGVNSVAAPIAGRDGVPLGALVVLGPASRLDSSAIHPAGRELMAA 254
           +T ARGYA+  EE + GV  V API   +G   GA+ V GPA RL    +   G EL  A
Sbjct: 175 VTAARGYAIDDEEIVLGVRCVGAPIVDTNGRVRGAISVAGPAYRLTPDRLQLLGPELADA 234

Query: 255 ARRITGTVGAVAISSGPRPRTRSGGFSDVQCVLPWGAQLGEAPVWVEREKRLYWVDILHP 314
           ARR       V     P   T   G ++   V    A  G  P+W  R + LYW D L P
Sbjct: 235 ARR-------VGAQLHPEAATVPNGAAEP--VPGHWAFHGAYPLWDSRNQCLYWADRLAP 285

Query: 315 AVH----RFDPVTGKNESCNVAKLVSAVLPTRNEGLIVASQDGVEHFDFDRGDFNPFAEP 370
           AVH      D V    E   VA      L  R++ +     + +   D D G      +P
Sbjct: 286 AVHCTLGGVDTVHASFEQPIVA------LVQRDDAVCAVVGEAMVAIDPD-GSTRSVDQP 338

Query: 371 EPGLPENRLNDAKVDPSGRLWVGSMRLDVSRPTGSLYRLTSAGEVTRAGSGFTVANGLAW 430
            P    + L     +  G LW    +  V+     + +L S G +            L W
Sbjct: 339 IP----SGLRALCDEAGGPLWAAVEQAGVT----VIGQLQSDGGINVQWRVSEAVQCLKW 390

Query: 431 SPDSSTFYFVDTVPGIIYAYDFDAREGSIANRRVFVTVPEAEGRPDGLAVDADGGVWCAI 490
             + +T +      G I       + G+   RR+  T+P+  G   GLA D++GG+W  +
Sbjct: 391 RSEDATLFAAAPDTGSILM----LKPGTPGVRRL-ATIPKGSGSVSGLAFDSEGGIWTCL 445

Query: 491 WDGWRVNRYRPDGRLDRAVELPVPRPTSVAFGGDELATLFITSARTRLPASTLTEAPLSG 550
             GW V R+  DG LDR V LPVP PT +AF G + ++L++ +AR  +    L +APLSG
Sbjct: 446 QGGWGVVRFAADGGLDRVVGLPVPCPTDLAFDG-QFSSLYVATARQSVSLEVLNDAPLSG 504

Query: 551 GIFACNPGA 559
            +F    G+
Sbjct: 505 RLFRIAGGS 513