Pairwise Alignments

Query, 276 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 276 a.a., ABC transporter for D-Mannitol and D-Sorbitol, permease component 1 (from data) from Pseudomonas simiae WCS417

 Score =  135 bits (340), Expect = 1e-36
 Identities = 76/276 (27%), Positives = 148/276 (53%), Gaps = 5/276 (1%)

Query: 2   QRTTLQTLSLYAGLAVVCGVLLFPIYWLFVTALSTLAEIRQLPPSFWPAEPQWSTFAKVG 61
           Q   LQ+L L      +  ++ FPI+W+ +T+  T  +    PP F    P    +  + 
Sbjct: 5   QSRRLQSLLLGTLAWAIAILIFFPIFWMVLTSFKTEIDAFATPPQFI-FTPTLENYLHIN 63

Query: 62  TERPIFLWLWNSTLAALGSVALSMVVSVFAGYSLSRFSVKGGRSLGLFILTAKMLPATLL 121
                F + WNS L +  + AL +++SV A YS++ +  +  +   L++L+ KMLP   +
Sbjct: 64  ERSNYFSYAWNSVLISFSATALCLLISVPAAYSMAFYETQRTKGTLLWMLSTKMLPPVGV 123

Query: 122 VIPLFGIFRSMGLIGSLWSLVLAHATLIIPFTTWMLKGYFDTIPRELEQAAMVDGCSPLG 181
           ++P++ + +S GL+ +  +L++ +  + +P   WM+  YF  IP+++ +AA +DG +   
Sbjct: 124 LMPIYLLAKSFGLLDTRIALIIIYTLINLPIVVWMVYTYFKDIPKDILEAARLDGATLWQ 183

Query: 182 ALFRVVLPVATPGLAATALYAFVLSWADYAYARTFLTNAQGSWTANL-GITTMKGEYVTD 240
            + RV+LP+A  GLA+T L + +L W +  ++    +++    TA +   ++ +G +   
Sbjct: 184 EMVRVLLPIAKGGLASTVLLSLILCWNEAFWSLNLTSSSAAPLTALIASYSSPEGLF--- 240

Query: 241 WNEISAAAVFIALPIILIYLFLERYLVGGLTAGAEK 276
           W ++SA +     PI++     ++ LV GL+ GA K
Sbjct: 241 WAKLSAVSTLACAPILIFGWISQKQLVRGLSFGAVK 276