Pairwise Alignments

Query, 276 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 280 a.a., Inner membrane ABC transporter permease protein YcjP from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  164 bits (415), Expect = 2e-45
 Identities = 89/278 (32%), Positives = 152/278 (54%), Gaps = 7/278 (2%)

Query: 3   RTTLQTLSLYAGLAVVCGVLLFPIYWLFVTALSTLAEIRQLPPSFWPAEPQWSTFAKVGT 62
           + TL  +  Y GLA+   + LFP + + +T+     E   L P+  P   QW+    V  
Sbjct: 5   KRTLSRIGFYCGLALFLIITLFPFFVMLMTSFKGAKEAISLHPTLLPQ--QWTLEHYVDI 62

Query: 63  ERPIFL----WLWNSTLAALGSVALSMVVSVFAGYSLSRFSVKGGRSLGLFILTAKMLPA 118
             P+      +  NS + ++ S  +++ + +   Y+LSR   KG  ++     T  M   
Sbjct: 63  FNPMIFPFVDYFRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSG 122

Query: 119 TLLVIPLFGIFRSMGLIGSLWSLVLAHATLIIPFTTWMLKGYFDTIPRELEQAAMVDGCS 178
            LLV+PLF I  ++G+  +  +L++   T  +P   +MLK YFDTIP E+E+AAM+DG +
Sbjct: 123 ILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLN 182

Query: 179 PLGALFRVVLPVATPGLAATALYAFVLSWADYAYARTFLTNAQGSWTANLGITTMKGEYV 238
            L  +FR+ +P+A  GL +  +Y F+++W DY +A  FL++A  ++T  +G+  +     
Sbjct: 183 RLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSA-SNFTLPVGLNALFSTPD 241

Query: 239 TDWNEISAAAVFIALPIILIYLFLERYLVGGLTAGAEK 276
             W  + AA++  ALP++++Y   ER++  GLTAG  K
Sbjct: 242 YIWGRMMAASLVTALPVVIMYALSERFIKSGLTAGGVK 279