Pairwise Alignments

Query, 276 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 278 a.a., ABC transporter, membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score =  167 bits (424), Expect = 2e-46
 Identities = 87/277 (31%), Positives = 150/277 (54%), Gaps = 7/277 (2%)

Query: 1   MQRTTLQTLSLY-AGLAVVCGVLLFPIYWLFVTALSTLAEIRQLPPSFWPAEPQWSTFAK 59
           ++R  L  + L+   L ++  V+LF I W+   +L    +    PP   P    WS + K
Sbjct: 6   LKRKNLDRIGLFFVALVMISPVILFFI-WMISLSLKYEIDNGAYPPILIPERFAWSNYVK 64

Query: 60  VGTERPIFLWLWNSTLAALGSVALSMVVSVFAGYSLSRFSVKGGRSLGLFILTAKMLPAT 119
           V  E   FL+ WNS L    +  L++V+ V AGY ++R   +      + I+ A+M P  
Sbjct: 65  VFEENSFFLYFWNSVLVTGAATILALVIGVPAGYGIARLKAEKS---AVVIMIARMTPGL 121

Query: 120 LLVIPLFGIFRSMGLIGSLWSLVLAHATLIIPFTTWMLKGYFDTIPRELEQAAMVDGCSP 179
             +IPLF +F+ + L+G+LW  ++ H  + +P   W++ GYF+T P+ELE+AA +DG S 
Sbjct: 122 SFLIPLFLLFQWLNLLGTLWPQIIIHLVVTVPIVVWIMIGYFETTPKELEEAASIDGASS 181

Query: 180 LGALFRVVLPVATPGLAATALYAFVLSWADYAYARTFLTNAQGSWTANLGITTMKGEYVT 239
                 V LP+A PG+  + + A + SW ++ +    +  ++ + T  + +  M      
Sbjct: 182 WQVFRLVALPIAKPGIVVSFILAVIFSWNNFVFG--IVLASRETRTLPVAVYNMLSFEQV 239

Query: 240 DWNEISAAAVFIALPIILIYLFLERYLVGGLTAGAEK 276
            W  ++AAA+ + LP++L+ +F ++ +V GLTAGA K
Sbjct: 240 SWGPLAAAALIVTLPVLLLTMFAQKQIVAGLTAGAVK 276