Pairwise Alignments

Query, 337 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 296 a.a., ABC transporter, permease protein from Variovorax sp. SCN45

 Score =  115 bits (289), Expect = 1e-30
 Identities = 69/253 (27%), Positives = 135/253 (53%), Gaps = 18/253 (7%)

Query: 45  ARPSRQHWLGYLLLLPAVALVALIIVYPLFVSLDLSFQKIGMATLSAPRKPFTLENYHKL 104
           AR +R  + G ++++P + +  + ++YP+   L L+            R P   ++Y KL
Sbjct: 24  ARHARWQFWGAVMVVPYLLVFVVFVLYPVGYGLWLA------------RHP---QSYVKL 68

Query: 105 FASPDFWNSCWVTIK-LVVVVSAACFAVGLGTALLVNNRFKGRTLARLFVALPWAVPEVI 163
              P F+ S   T+  L+V ++       + +   V +R+  + +A +F+ LPWA+P + 
Sbjct: 69  VEDPIFFRSVINTVVFLIVAINVKMLVALVLSGFFVISRWWIKIVAAIFI-LPWAMPSIP 127

Query: 164 AVVIFAWIFDSSFGLMNWLFIKLGITSQMINWFSEPTAAFWVVAITMIWKGYPFVSIMTL 223
            ++ F ++ +  +G++N    +L   +   NW ++PT A     +  IWK  PF +++ +
Sbjct: 128 TILSFRFMLNPEWGVINTTIFRL-TGADGPNWLNDPTLALGFAMVVHIWKSLPFWTLILV 186

Query: 224 AGLQSIPEDFYNAAKVDGANAFQRFWYITIPVLMPVLGVTSVLVVLWVFRDFSIIKVLTD 283
           AG  +IP + Y AA VDGA+++Q+F +++ P L  +   + +L ++W   DF+ + +LT 
Sbjct: 187 AGRLAIPGEQYEAASVDGASSWQKFRFVSWPALKTLYITSLILSMIWTLGDFNSVYLLTG 246

Query: 284 GGPLKATQTLSIM 296
           GGP   T  L+ +
Sbjct: 247 GGPADLTHVLATL 259