Pairwise Alignments

Query, 337 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., ABC transporter for Lactose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  124 bits (312), Expect = 2e-33
 Identities = 94/283 (33%), Positives = 144/283 (50%), Gaps = 19/283 (6%)

Query: 54  GYLLLLPAVALVALIIVYPLFVSLDLSFQKIGMATLSAPRKPFTLENYHKLFASPDFWNS 113
           G+L + PA+ L+ L +VYP+  SL +SFQ     TL    K     N  +L+  P F  +
Sbjct: 16  GWLFVAPALGLITLFMVYPIAWSLWMSFQSGRGMTL----KFAGFANIVRLWNDPVFIKA 71

Query: 114 CWVTIKLVVVVSAACFAVGLGTALLVNN-RFKGRTLARLFVALPWAVPEVIAVVIFAWIF 172
              T+   VV       + L  A L+NN R  GR + R  + LP     V   V+F  +F
Sbjct: 72  LTNTMTYFVVQVPIMILLALILASLLNNPRLVGRGVFRTAIFLPCVSSLVAYSVLFKGMF 131

Query: 173 DSSFGLMNWLFIKLGITSQMINWFSEPTAAFW-----VVAITMIWKGYPFVSIMTLAGLQ 227
            +  G++N     +G+ +  I W + P   FW     ++AIT  W GY    I  LA LQ
Sbjct: 132 ATD-GIVNSTLQAIGLAASPIPWLTHP---FWAKVLVILAITWRWTGYNM--IFYLAALQ 185

Query: 228 SIPEDFYNAAKVDGANAFQRFWYITIPVLMPVLGVTSVLVVLWVFRDFSIIKVLTD--GG 285
           +I +  Y  A++DG  A+ R  ++TIP+L PV+  T+V+  +   + F  +  LT+  GG
Sbjct: 186 NIDKSIYEVARIDGVPAWARLTHLTIPLLKPVILFTTVISTIGTLQLFDEVYNLTEGKGG 245

Query: 286 PLKATQTLSIMTYDQAFGFF-NMGYASAIGIVTLVLCVVASLL 327
           P  AT TLS+  Y+  F F  N+GYA+ +  V +VL  + + +
Sbjct: 246 PSNATLTLSLYIYNLTFRFMPNLGYAATVSYVIVVLVALLAFV 288