Pairwise Alignments

Query, 337 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., ABC transporter for L-Fucose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  145 bits (366), Expect = 1e-39
 Identities = 87/267 (32%), Positives = 135/267 (50%)

Query: 56  LLLLPAVALVALIIVYPLFVSLDLSFQKIGMATLSAPRKPFTLENYHKLFASPDFWNSCW 115
           LLLLPA  ++A+ IV PL  SL  SF    +    +        NY  +  + +FW +  
Sbjct: 11  LLLLPAFIVLAVFIVLPLIFSLYSSFTPFRLTKPDSLWVFIGFRNYVNVLTNAEFWVAFG 70

Query: 116 VTIKLVVVVSAACFAVGLGTALLVNNRFKGRTLARLFVALPWAVPEVIAVVIFAWIFDSS 175
            T+ L+ V   A   +GLG ALLVN    G+   R  +  P     V+    F ++F+ +
Sbjct: 71  RTVLLLTVALNAEMFLGLGLALLVNKATYGQRALRTAMMFPMMFSPVLVGFQFKFLFNDN 130

Query: 176 FGLMNWLFIKLGITSQMINWFSEPTAAFWVVAITMIWKGYPFVSIMTLAGLQSIPEDFYN 235
            G +N     LG+T + I W  +   A + + +  +W      +I+ LAGL ++P+D   
Sbjct: 131 IGFVNNALQSLGLTDRAIPWLIDGNLALFSIIVAEVWSSTAVFAILILAGLLAMPKDPVE 190

Query: 236 AAKVDGANAFQRFWYITIPVLMPVLGVTSVLVVLWVFRDFSIIKVLTDGGPLKATQTLSI 295
           AA VDG   +Q F Y+T P LMP   +   +  L V R + I+K++TDGGP K T+ L  
Sbjct: 191 AAHVDGCTPWQTFRYVTWPYLMPFAFIAMTIRSLDVARAYDIVKIMTDGGPAKRTELLWT 250

Query: 296 MTYDQAFGFFNMGYASAIGIVTLVLCV 322
           +    A+G   MG A+A+  V ++L +
Sbjct: 251 LIGRTAYGDARMGMANAMAYVAILLSI 277