Pairwise Alignments

Query, 337 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 293 a.a., predicted sugar transporter subunit: membrane component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score =  160 bits (406), Expect = 3e-44
 Identities = 86/278 (30%), Positives = 157/278 (56%), Gaps = 9/278 (3%)

Query: 56  LLLLPAVALVALIIVYPLFVSLDLSFQKIGMATLSAPRKPFTLENYHKLFASPDFWNSCW 115
           LLL P++ L+  ++ +P+  ++++SF ++ +   +       + NY ++ + P FW+S W
Sbjct: 16  LLLAPSLLLLGGLVAWPMVSNIEISFLRLPLNP-NIESTFVGVSNYVRILSDPGFWHSLW 74

Query: 116 VTIKLVVVVSAACFAVGLGTALLVNNRFKGRTLARLFVALPWAVPEVIAVVIFAWIFDSS 175
           +T+    +V A    +GL  A+  N  F+ R  AR  V L +  P +  V  + ++F++ 
Sbjct: 75  MTVWYTALVVAGSTVLGLAVAMFFNREFRLRKTARSLVILSYVTPSISLVFAWKYMFNNG 134

Query: 176 FGLMNWLFIKL-GITSQMINWFSEPTAAFWVVAITMIWKGYPFVSIMTLAGLQSIPEDFY 234
           +G++N+L + L  +  Q   WF  P ++F +V +  IW+ +P+  I  LA LQ+I +  Y
Sbjct: 135 YGIVNYLGVDLLHLYEQAPLWFDNPGSSFVLVVLFAIWRYFPYAFISFLAILQTIDKSLY 194

Query: 235 NAAKVDGANAFQRFWYITIPVLMPVLGVTSVLVVLWVFRDFSIIKVLTDGGPLKATQTLS 294
            AA++DGANA+QRF  +T+P +MPVL     L  +W+F  F+ + +LT          L 
Sbjct: 195 EAAEMDGANAWQRFRIVTLPAIMPVLATVVTLRTIWMFYMFADVYLLT-----TKVDILG 249

Query: 295 IMTYDQAFGFFNMGYASAIGIVTLVLCVVASLLMLGRK 332
           +  Y  AF F ++G A+AI +V  +  ++ ++++L RK
Sbjct: 250 VYLYKTAFAFNDLGKAAAISVVLFI--IIFAVILLTRK 285