Pairwise Alignments

Query, 337 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 311 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score =  146 bits (368), Expect = 8e-40
 Identities = 87/284 (30%), Positives = 142/284 (50%), Gaps = 3/284 (1%)

Query: 46  RPSRQHWLGYLLLLPAVALVALIIVYPLFVSLDLSFQKIGMATLSAPRKPFTLENYHKLF 105
           R  R+ W+G L + PA+ LV +  + PL ++  +S     +  +  PR      NY  L+
Sbjct: 21  RKPRRDWMGLLYVAPALLLVLVFFLVPLGMTAWMSLHNWPL--IGMPRW-IGFANYKVLW 77

Query: 106 ASPDFWNSCWVTIKLVVVVSAACFAVGLGTALLVNNRFKGRTLARLFVALPWAVPEVIAV 165
              +FWN+   TI+  V  +      G G ALL+        L R    LP  +    A 
Sbjct: 78  NDINFWNALAFTIRYTVAATVGLMLAGFGLALLIERPRPFANLYRNAFFLPVVIGFASAS 137

Query: 166 VIFAWIFDSSFGLMNWLFIKLGITSQMINWFSEPTAAFWVVAITMIWKGYPFVSIMTLAG 225
           ++++W+ +   GL + L   LG+T   +N  +    +FW V   +IWK   F  ++ ++G
Sbjct: 138 LLWSWLSNVDSGLFSPLAETLGLTDGRVNLLATFAPSFWSVTAMVIWKMAGFYMVILMSG 197

Query: 226 LQSIPEDFYNAAKVDGANAFQRFWYITIPVLMPVLGVTSVLVVLWVFRDFSIIKVLTDGG 285
           LQ+IP DF  AA++DGANA QRF +IT+P++     +  +L +      F    ++  GG
Sbjct: 198 LQAIPTDFIEAARIDGANALQRFRFITLPLVRRSFALALILCISGSMLAFDQFYIILAGG 257

Query: 286 PLKATQTLSIMTYDQAFGFFNMGYASAIGIVTLVLCVVASLLML 329
           P   T T     + Q+F  F +GY +A+ +V L + VV S++ L
Sbjct: 258 PQNKTITAVYWIFSQSFVSFRLGYGAALSMVLLAILVVLSIVQL 301