Pairwise Alignments

Query, 441 a.a., transport protein from Sinorhizobium meliloti 1021

Subject, 469 a.a., GABA permease from Pseudomonas simiae WCS417

 Score = 97.8 bits (242), Expect = 6e-25
 Identities = 87/372 (23%), Positives = 161/372 (43%), Gaps = 24/372 (6%)

Query: 16  TAIVVGNMVGSGFYL-SPAAVAPYGNLAIVIWIVMGAGAICLGLTFARLAKLSPAVGGPY 74
           T + +  ++G+G ++ S  A+A  G   ++ ++  G   + +      +A  +P  G   
Sbjct: 23  TMLSIAGIIGAGLFVGSGHAIAAAGPAVLLAYLFSGTLVVLVMRMLGEMAVANPDTGSFS 82

Query: 75  AYTRLAYGDFPGFLIAWGYWISIWASLPVIAVAFAGVVIDFFPFLRGRGTATLLTLSVIW 134
            Y   A G + GF I W YW      +P+ A+A   ++  +FP +     A L  L  I+
Sbjct: 83  TYADQAIGRWAGFTIGWLYWWFWVLVIPIEALAAGHILNQWFPQI----DAWLFALLSIF 138

Query: 135 LVVLVNLRGVHAAGLFSEITTYAKMIPFGAVALLGL-FYIDFSHFADFNPSG-QPLLQAS 192
           L+V+ NL  V   G F      AK+I    +A +GL F +      +   SG   L++  
Sbjct: 139 LLVVTNLFSVSKYGEFEFWFAMAKVI--AIIAFIGLGFAVLMGWIPEREVSGLSRLMEEH 196

Query: 193 AALAP-----------LTMFAYLGLESATVPAGDVRDAERTIPRSTVLGIAIAVTLYVLG 241
              AP             MF+++G E+ T+ A +  +  + I R+T   +      Y+L 
Sbjct: 197 GGFAPNGLSAVVGAFITIMFSFIGTEAVTIAAAESSNPAQNIARATRSVMWRIGVFYLLS 256

Query: 242 TIVVMGLVP-REELVHSVAPFSEAARRMWGPAGELAISLAVVLSSIGALNGWTLLMGQVP 300
             VV+ +VP  + L+ SV  +  A   M  P  +L + + V+++    +N    +  ++ 
Sbjct: 257 IFVVISVVPWNDPLLASVGSYQRALELMNIPHAKLLVDVVVLIAVASCMNSSIYIASRML 316

Query: 301 MAAARDGLFPPLFSRLSARHVPATGIVVSATLATILVLVQAAGSEGFSSIYRLFVGLSTM 360
            +  + G  P L  + SA  VP   ++ S  L   + L       G   +++  +  S  
Sbjct: 317 FSLGKRGDAPALMKKTSAASVPRAAVIASTILGAGVTLFSYFAPAG---LFQFLLASSGA 373

Query: 361 TAVIPYAFCALA 372
            A++ Y   A++
Sbjct: 374 IALLVYLVIAVS 385