Pairwise Alignments

Query, 313 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 275 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score = 47.8 bits (112), Expect = 3e-10
 Identities = 65/298 (21%), Positives = 117/298 (39%), Gaps = 51/298 (17%)

Query: 11  SGRRIVRFGLTLGAVTVSM-----WASAEAQTLDRIRSSSTVKLGYDATARPFSFKAEGE 65
           S   + R G  L A+ +++      ASA A  LD I ++  +++  D    P+  K E  
Sbjct: 5   SSLSLKRRGALLSALALALPLAFAGASAHADQLDTIMAAKKIRVAIDLAVPPYGLKDEKL 64

Query: 66  SATGYAVSLCMEVVEELKRELGIADLAVEWIELTREAADHAIRQGSADLFCGASPVTLTR 125
           +ATG  V    E    L + LG   L +E +  T       ++   AD+   +  VT  R
Sbjct: 65  NATGSDV----ETARLLAKSLG---LELEIVPTTGANRIPFLQTDKADIVISSMSVTPER 117

Query: 126 RKEVSFSI------AIFPSGTGAVLNASAPLALREVL-TQGRPSDRPIWRGSPARTVLNQ 178
            K V FS+      A+  +     +   A LA ++V+ T+G  +D+ + +  PA T    
Sbjct: 118 EKVVDFSVPYAAILAVVGAPKSMTITGPADLAGKKVIATRGTTNDQEVTKILPAGT---- 173

Query: 179 KTFSPIAGTTSEDWLAERIKTFQLSATIAAVENYDQGIANILNGESDVLFGDLPLLLDAA 238
                            +I  F   AT          I  +++G++D+     PLL    
Sbjct: 174 -----------------QIVRFDDDAT---------SITAVVSGQADIFATAPPLL--KT 205

Query: 239 ARGENSGDLIVLKRHFTYEPLALVLARNDEDFRIVVDRALSRTYRSEDFPAFFSEWFG 296
              +N    +  K       LA+ + +N+   +  +D  +    +S +    + ++ G
Sbjct: 206 INEKNPAKQMEPKFTMKVNMLAIGMRKNEPRLKAKLDEFVKAQLKSGELNTIYKKFHG 263