Pairwise Alignments

Query, 400 a.a., TRm3 transposase from Sinorhizobium meliloti 1021

Subject, 407 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  557 bits (1435), Expect = e-163
 Identities = 270/397 (68%), Positives = 325/397 (81%), Gaps = 3/397 (0%)

Query: 2   AIEKELLDQLLAGRDPSEVFGKDGLLDDLKKALSERILNAELDDHLDVERLEGGPANRRN 61
           +I  ++LDQLLAG D +    + GLLD L+KA +ER LNAE+D HL  E  E G  N RN
Sbjct: 8   SIPNDILDQLLAGTDAAAALSQGGLLDTLRKAFAERALNAEMDHHLGQE--EQG-TNSRN 64

Query: 62  GSSKKTVLTGTSKMTLTIPRDRAGTFDPKLIARYQRRFPDFDDKIISMYARGMTVREIQG 121
           G  +KTV T   ++ + +PRDRAG+FDP+LIA+YQRRFP FDDKIISMYARGM+ REI G
Sbjct: 65  GYGRKTVTTDGGRIEIEVPRDRAGSFDPQLIAKYQRRFPGFDDKIISMYARGMSTREITG 124

Query: 122 HLEELYGIDVSPDLISAVTDTVLEAVGEWQNRPLELCYPLVFFDAIRVKIRDEGFVRNKA 181
           HL ELYGI+ SPDLIS +TD VLE V  WQ RPL+  YPLVFFDAIRVKIRDEG VRNKA
Sbjct: 125 HLRELYGIEASPDLISTITDAVLEEVTAWQQRPLDPAYPLVFFDAIRVKIRDEGMVRNKA 184

Query: 182 VYVALAVLADGSKEILGLWIEQTEGAKFWLRVMNELKNRGCQDILIAVVDGLKGFPEAIT 241
           +++AL V+ADG+K +LGLW+EQ EGAKFWLRVMNEL+NRG +DI++AVVDGLKGFP+AIT
Sbjct: 185 IHIALGVMADGTKVVLGLWLEQNEGAKFWLRVMNELRNRGVEDIMLAVVDGLKGFPDAIT 244

Query: 242 AVFPQTIVQTCIVHLIRHSLEFVSYKDRRTVVPALRAIYRARDAEAGLKALEAFEEGYWG 301
           AVFP+ +VQTCIVHL+R+S++FV++KDR+ +  AL+AIYRA DA A  +AL AFE  +WG
Sbjct: 245 AVFPEAMVQTCIVHLLRNSMDFVAWKDRKALGTALKAIYRAVDAAAAEEALTAFEASFWG 304

Query: 302 QKYPAIAQSWRRNWEHVVPFFAFPEGVRRIIYTTNAIEALNSKLRRAVRSRGHFPGDEAA 361
           Q+YPAI QSWRR W  V+PFFAFP+ VRRI+YTTNAIEALNSKLRRAVR+RGHFP DEAA
Sbjct: 305 QRYPAIGQSWRRAWSEVIPFFAFPDEVRRIVYTTNAIEALNSKLRRAVRARGHFPNDEAA 364

Query: 362 MKLLYLVLNNAAEQWKRAPREWVEAKTQFAVIFGERF 398
            KLLYL+LN + ++WK  PREW  AK QFAV+FGERF
Sbjct: 365 TKLLYLILNRSEKEWKMPPREWNMAKAQFAVLFGERF 401