Pairwise Alignments

Query, 384 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 355 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 76.6 bits (187), Expect = 1e-18
 Identities = 79/340 (23%), Positives = 146/340 (42%), Gaps = 23/340 (6%)

Query: 27  TEIARIGLVGLFAYWSFTLIAPFAIILIWAAILAVALYPAYAALSAILGQRPRVAALVIT 86
           T +  +GLV +   W   ++ PF   + WA IL +   P    L    G    + +L   
Sbjct: 10  TLLLLLGLVTIAFIW---ILLPFYGAVFWAVILGIIFAPMQRRLQQRFGWNRNLTSLATL 66

Query: 87  MLGLLVIVAPLAAIAFSFAEGLQVVLARLNDRSLLISAPPDSIRS-FPLIGERIYSVWSM 145
              L++ + P+   +    +    +   +    L ++   +  ++  P   + +   + M
Sbjct: 67  SACLIIAILPVIITSALLVQEGATLYKNIESGKLDVAGYIEQFKNVLPPYFQHLLDRFGM 126

Query: 146 ASDNLEAVLQQIKPALLQAGSKALGKIASIGAD----LLSFVVSVLVAGFLFGSGARLAN 201
              NLE + ++I  + +Q       +  S G      L+SF + + +  FL   G  L  
Sbjct: 127 G--NLEGLREKIVKSAMQGSQFFATQAFSFGQGTFDFLVSFFIMLYLLYFLLRDGPELVR 184

Query: 202 ---SAQGFASRMGGDRGVGFLQLAAATIRNVARGVIGVALLQAFLCILILSLFKVPAPGA 258
              +A   A        + F ++  AT++    G + VA+ Q  L  LI     +P+   
Sbjct: 185 KVRTAVPLAEPQKRRLQLKFNRVVRATVK----GNVLVAVTQGALGGLIFWFLDIPSALL 240

Query: 259 IAFVVLILCIIQ-IGPALALLPVIVWAWTS---MEFGMAALFTILLIPLLIIDNVMKPIL 314
            A ++  L ++  +G  +   PV  +   S    +  + ALF + +I L  +DNV++PIL
Sbjct: 241 WAVLMAFLSLLPAVGAGIVWGPVAAYFLLSGAIWQGVVLALFGVFVIGL--VDNVLRPIL 298

Query: 315 VARGLSTPTLVILLGVLGGTLSYGLIGLFLGPIVLSVFHS 354
           V +    P  +IL+  LGG   +GL G  +GP+V ++F S
Sbjct: 299 VGKDTKMPDYLILISTLGGLSVFGLNGFVIGPLVAALFMS 338