Pairwise Alignments

Query, 384 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 350 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  199 bits (506), Expect = 1e-55
 Identities = 117/338 (34%), Positives = 185/338 (54%), Gaps = 10/338 (2%)

Query: 26  ITEIARIGLVGLFAYWSFTLIAPFAIILIWAAILAVALYPAYAALSAILGQRPRVAALVI 85
           + +I  + L+G    W   ++APF   L+W AILA A +P    L+ +LG R  +AA ++
Sbjct: 8   LVQILLVALLGA-GLW---VMAPFISALLWGAILAFASWPLMRFLTRLLGGRETLAAGLL 63

Query: 86  TMLGLLVIVAPLAAIAFSFAEGLQVVLARLNDRSLLISAPPDS---IRSFPLIGERIYSV 142
           TM  +L++  PL  + F+ A+ ++   A + D  + +   PD+   +   P +GER+ + 
Sbjct: 64  TMAWILIVALPLVWLGFNLADHIRDATAFVRD--VQVDGLPDAPAWLGGIPFVGERLVNG 121

Query: 143 WSMASDNLEAVLQQIKPALLQAGSKALGKIASIGADLLSFVVSVLVAGFLFGSGARLANS 202
           W        A+L  IKP   Q G+  L + A IG+ +L   +S++   F +  G RLA  
Sbjct: 122 WQSLDQKGAALLTSIKPYFGQVGNWLLARSAQIGSGVLELTLSLVFVFFFYRDGPRLAAF 181

Query: 203 AQGFASRMGGDRGVGFLQLAAATIRNVARGVIGVALLQAFLCILILSLFKVPAPGAIAFV 262
                 R+ G+R   +L L AAT++ V  GVIG A  QA L ++   +  VP    +  V
Sbjct: 182 VLRLLHRLVGERAEYYLDLVAATVQRVVNGVIGTAAAQALLALIGFLIAGVPGAIVLGLV 241

Query: 263 VLILCIIQIGPALALLPVIVWAWTSMEFGMAALFTIL-LIPLLIIDNVMKPILVARGLST 321
             +L +I +GP LA +P   W     E+GMA    +     +  +DNV+KP L++RG + 
Sbjct: 242 TFMLSLIPMGPPLAWIPATAWLVWKGEYGMAVFLGVWGTFVISGVDNVLKPYLISRGGNL 301

Query: 322 PTLVILLGVLGGTLSYGLIGLFLGPIVLSVFHSLLLIW 359
           P +++LLGV GG L++G IGLF+GP +L+V +SLLL W
Sbjct: 302 PLVIVLLGVFGGLLAFGFIGLFIGPTLLAVGYSLLLDW 339