Pairwise Alignments

Query, 523 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 294 a.a., small-conductance mechanosensitive channel MscS from Erwinia tracheiphila SCR3

 Score = 74.3 bits (181), Expect = 5e-18
 Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 10/215 (4%)

Query: 293 AVTVLTILSGLGVQIAPLIAGAGIFGVAIGFGSQTLVKDVLSGVFYMLDDAFRVGEYIQS 352
           A T +  L  +GVQ A +IA  G  G+A+G   Q  + ++ +GV  ++   FR G++I  
Sbjct: 79  AFTFIAALGRIGVQTASVIAVLGAAGLAVGLALQGSLSNLAAGVLLVMFRPFRTGDFIDI 138

Query: 353 GSYKGTVESFSLRSVRLRHHRGPIFTVPFGEL--GAVQNMSRDWV-IDKMTLNVTYDADV 409
           G   GTV S  + S  L+   G I  VP G++  G + N SR+ V  ++  + V+YDADV
Sbjct: 139 G-VMGTVTSVQIFSTTLKSSDGKIVVVPNGKIIAGNIVNYSREPVRRNEFIIGVSYDADV 197

Query: 410 DLARKLIKKVGQELAADPEFAADTIEPLKMQGVDSFGDFAIVLRMKLMTKPGAQFTIKRR 469
           D   KL ++V   + A+P    D    +   G++     ++   ++  +  G    +   
Sbjct: 198 DNVIKLFQEV---VDAEPRVLQDRGVQI---GLNELAASSMNFVVRCWSNAGDLQNVYWD 251

Query: 470 AFMMIKKAFDENGIKIAVPTVHVSGGSDNAAAAQQ 504
                K+A D N I I  P + V    D ++ + +
Sbjct: 252 LMKNFKRALDANDIGIPYPQMDVHLHQDKSSTSAE 286